| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3253 |
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| Symbol | |
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| ID | 4674295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3437997 |
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| End bp | 3439118 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639840293 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_987452 |
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| Protein GI | 121595556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.363046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTC CGTTCCGCAT GCACACCGTC GTTGCCGCAC TGGGTCTGGC CGGTGCCGCT
TTGTTCTCCA CCGCGCATGC GCAAGTCAAG ATCGCCATGG TGATGCCCAC CACTGGCCCG
CTGACGCAGT ACGGTGACAT GGTCAAGGAA GGCGTGACCA CGGCCGTCGA GATGGCCAAC
GCCGCTGGCG GCGTGGGCGG CAAGAAGATC GAGTTGGTCT CCATCGACGA TGCCTGCGAA
CCCAAACAAG GCCCCGTGGC CGCCAACCGT GTGGTGAATG CCAAGATCGG TTACGTGATC
GGCCCGGTGT GCTCGGGTGC CTCCATCGCT GCCGCTCCCA TCTACAACAA CGAGGGCGTG
GTCGTCATCA CCCCGTCGGC CACCTCCCCG GCGCTCACCG ACGGCAAGAA CTACCACTTC
ATCTTCCGCA CCATCGGCCG TGACGACCAA CAAGGCCCTG CCGCTGCCAA GTTCATCGCC
GAAAAGGCCA AGCCCAAGAA GGTCGCCGTG CTGCACGACA AGCAGTCCTA TGGCCAGGGC
ATCGCCTCCT CCGTGCGTGA CGACCTGAAG AAGGCCGGCA TCACCGTGGC GCTGTTCGAA
GGCATCAACG CCGGCGACAG CGACTACTCC GCCGTCATCA CCAAGCTCAA GAGCGCTGGC
GTGGACTTCG TGTACTACGG CGGCTACCAC CCCGAGATGG GCCTGCTGCT GCGCCAGGCC
GGCGAGCAAG GCCTGAAGGT GCGCATGATG GGCCCCGAGG GCGTGGGCAA CCCTGAGGTG
AACGCCATTG CCGGTAACGC CGTGGAAGGC ATGCTGGTGA CGCTGCCGGC CGACTTCGCT
GCCAACCCCA AGAACGCTGC CGTCGTGGCC GCCTTCAAGG ACAAGAAGCG CAATGCGTCC
GGCGCCTTCC AGCTGACCTC GTTCGCCGCC ACCCAGGCAC TGCTGGACAG CATCAAGGCC
GTGGGTGACA ACCCTGCCAA GGTGGCCGAC CACCTGCACA AGAGCACCAT CGAAACGGTG
CTGGGCCCCG TGTCCTGGAA CAAGCAGGGC GACCTGAACA GCTTCGACTT CCAGGTCTTC
CAGTGGCACA AGGACGGCAG CAAGAGCCTG GCCGCCAAGT AA
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| Protein sequence | MSIPFRMHTV VAALGLAGAA LFSTAHAQVK IAMVMPTTGP LTQYGDMVKE GVTTAVEMAN
AAGGVGGKKI ELVSIDDACE PKQGPVAANR VVNAKIGYVI GPVCSGASIA AAPIYNNEGV
VVITPSATSP ALTDGKNYHF IFRTIGRDDQ QGPAAAKFIA EKAKPKKVAV LHDKQSYGQG
IASSVRDDLK KAGITVALFE GINAGDSDYS AVITKLKSAG VDFVYYGGYH PEMGLLLRQA
GEQGLKVRMM GPEGVGNPEV NAIAGNAVEG MLVTLPADFA ANPKNAAVVA AFKDKKRNAS
GAFQLTSFAA TQALLDSIKA VGDNPAKVAD HLHKSTIETV LGPVSWNKQG DLNSFDFQVF
QWHKDGSKSL AAK
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