Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3245 |
Symbol | |
ID | 4672083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3429188 |
End bp | 3430501 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639840285 |
Product | sugar transferase |
Protein accession | YP_987444 |
Protein GI | 121595548 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC CTGTTGTCAC CTCCCGACCC TGCGCCGAAC CCGACCCGGC ACGGCGTGAT GGCGCGCTGT TGTGGTGGAG CCTGCTCGGC CTGTTGCCTC AAGCGCTGGG TTACGCCATA GCGCACAAGA TGCAACACGC AGGCTGGGTC ACACCGCTGT TCCCCGCCAC CGTGCTGTGG TGTGCGGTGT CCTACCTGTT GGCAACACGC TGGCTGCACC AGGGTGCCCA TCTACCGCCG CGGGAGCAGG GTGGCTTTTT GCTGGTGGTG ATCACGGTGG CCTTTCTGCT CACCCCGTTG GGCTTTGCAC TGCTGCAAGC GCCCTATTCG CGCGGCGCCG TATTGATGGC CTACATGCTG GCCTTGGCTT GGCTGCTGTG CGGGCATGCG CTGTGGGGGA CCCGTCGTAC GCTGCACCTG GCCTACGTGG ATGCCGACTT ACCCTACGTC CTGCGCCAAA TGCTGCGCCC GCAGGAGCAA GGCGATGACC GACTGCGCCT GACCAGCTGG GTGGCCGGAC TACCAGCGCG AAAACAGCGC GTAGCCGTGG ACGGTGTGGT GCTAGACCGG CTGGCTGATC CCGACCCGCA ACGCCAACAA TGGATCAGCG AGCTCAAACT CCAGCGCATC CCTCTCTACA GCGCAGAAGC GGCAGCGGAA ATGCTGTCGG GCCGCAAAAT CACCGGGACG CTGGGCGAGC AAGATCTATG GCAACTGACC AATTACCCTG CTTACGACAT CGCCAAGCGC ATGCTGGACT TGGGCCTGAC CCTCATCATG GTGCCGCTAT GGGTTCCGCT GTGTATGGCC ACGGGGCTGG CAGTGAAGTT CGATTCACCC GGCCCGATGT TGTACTCGCA GCAGCGCATG GGTCGCCACG GACGCAGCTT CCGCATATGG AAGCTGCGCA GCATGCGTCA CGAGCCTGCC AGCCACATCG TTCAGTTCGC CAAACAGCAG GACGACCGTA TCACGTCAGT TGGCCGCTTC ATCCGCCGCA CGCGGCTCGA TGAACTACCC CAGCTCTGGA ACGTACTGCG CGGAGAAATG AGCCTGATCG GCCCGCGTCC CGAGCAGGCA GAGTTCGCGC ACCACTTTGC CGCAACCATG CCCGCCTACC CCTACCGCCA CTTGGTGCGC CCCGGTCTCA CGGGCTGGGC GCAGGTGCAG CATGGCTATA CCGATAGCGC CGAGCAGACC GCTATCAAGC TGAGCTATGA CCTGTATTAC GTGACGCACT GCTCCATGGC TCTGGATCTG CTCATTGCCT ACAAGACGGT GCGCACGGTG CTCACAGGTT TCGGAGCGCG CTAG
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Protein sequence | MTQPVVTSRP CAEPDPARRD GALLWWSLLG LLPQALGYAI AHKMQHAGWV TPLFPATVLW CAVSYLLATR WLHQGAHLPP REQGGFLLVV ITVAFLLTPL GFALLQAPYS RGAVLMAYML ALAWLLCGHA LWGTRRTLHL AYVDADLPYV LRQMLRPQEQ GDDRLRLTSW VAGLPARKQR VAVDGVVLDR LADPDPQRQQ WISELKLQRI PLYSAEAAAE MLSGRKITGT LGEQDLWQLT NYPAYDIAKR MLDLGLTLIM VPLWVPLCMA TGLAVKFDSP GPMLYSQQRM GRHGRSFRIW KLRSMRHEPA SHIVQFAKQQ DDRITSVGRF IRRTRLDELP QLWNVLRGEM SLIGPRPEQA EFAHHFAATM PAYPYRHLVR PGLTGWAQVQ HGYTDSAEQT AIKLSYDLYY VTHCSMALDL LIAYKTVRTV LTGFGAR
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