| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3180 |
|---|
| Symbol | |
|---|
| ID | 4672661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3364325 |
|---|
| End bp | 3365302 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639840220 |
|---|
| Product | adenosylcobinamide-phosphate synthase |
|---|
| Protein accession | YP_987379 |
|---|
| Protein GI | 121595483 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTCT GGACTCTGGA TCCTTTCCTC CTGGCTTGCG CCCTGCTGCT GGCGCTGGCC
ATCGACGGCC GCTGGGGCGA GCCCCCCGCT GCCTTTCATC CCGTCGTGTG GATGGGGCGG
GCGCTGGGGT GGGCCGGTAT GCGCATCGCG CCGCTGCAGG CCACAGGTCG GGATATACGG
TCTTTTTGCG CTGCAGCGCT TGTCTGGTGC GCGCTGGCAG CTATCGTTTT AATAGTATCC
GGCGCTTTGC AGTGGGTCGC CATCACGTTG CTTCCCGTCT GGGGTGCAGC GCTCGTAGTG
GGATTGCTGC TGAAACCTAT GCTGGCCTGG CGCATGCTGC GCGGGGAAGT GCTGGCGGTG
GAAGATGCGC TGGCGCAGTC GCTGGATGCG GGGCGCGAGC GACTGTCCTG GCTGGTCAGC
CGTGATGTGC AAGGGCTCGA TGCGGCGGCC GTGCGCGAGA GCGCCATTGA ATCCCTGGCC
GAGAATCTCA GCGACTCCGT GGTTGCGCCG CTGTTCTGGT TCGTGCTGCT GGGCCTGCCC
GGTGCGGCGC TTTACCGCTT TGCCAATACG GCCGACGCGA TGTGGGGATA CCCCGGCATG
CGCGGTGGGC GCTACTGGAA ATGGGCGGGC AAGTGGGCGG CGCGTGCGGA CGATGTGCTG
TCCTGGCTGC CCGCGCGCAT CACGGCGGTG CTGTTGTGGG GTGTGTCGCG TGGCAACGGC
GCCCGCTTGA CTGATCTGCG CGCGCAGTCG CGTCTCACGC CGTCGCCCAA CGGCGGGTGG
CCCATGGGGG CGATGGCGCT GGCGTTGGGG GTGCGCCTGT CCAAACCAGG TGTGTACGTG
TTGAACGCCC CCGGGCGTGC GCCCCAGGCC GCGGACACGC AGCGTGCGGT GCATTTGGCA
TCAAAAACAC TGCTAGCGCT TGTGGTGCTT GCGGTAGCAG CTCTGTTATT GATAGCTATA
GTGCACACCC ATGTCTGA
|
|---|
| Protein sequence | MPLWTLDPFL LACALLLALA IDGRWGEPPA AFHPVVWMGR ALGWAGMRIA PLQATGRDIR
SFCAAALVWC ALAAIVLIVS GALQWVAITL LPVWGAALVV GLLLKPMLAW RMLRGEVLAV
EDALAQSLDA GRERLSWLVS RDVQGLDAAA VRESAIESLA ENLSDSVVAP LFWFVLLGLP
GAALYRFANT ADAMWGYPGM RGGRYWKWAG KWAARADDVL SWLPARITAV LLWGVSRGNG
ARLTDLRAQS RLTPSPNGGW PMGAMALALG VRLSKPGVYV LNAPGRAPQA ADTQRAVHLA
SKTLLALVVL AVAALLLIAI VHTHV
|
|---|
| |