Gene Ajs_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3159 
Symbol 
ID4673532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3341483 
End bp3342199 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID639840201 
Productphosphoserine phosphatase 
Protein accessionYP_987360 
Protein GI121595464 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGA CTCCTTTTGA ATTTGCCCCC GGTCTCGTCG TGCAGGGCAT CACGCCGCCG 
CTGCGGCTGG CCGACTACAA GCTCATCGCC TTCGACATGG ACTCCACGCT CATCAGCATC
GAATGCGTGG ACGAGATCGC CGACGCCGCC GGCCGCAAGG CCGAGGTGGC TGCCATCACC
GAGGCCGCCA TGCAGGGCCT GATCGCCGAC TACAAGGAAA GCCTGCGCCA GCGCGTGGCG
CTGCTCAAGG GCGTGGGCAC GGACCACCTG GAGCGCGTGT TCACCGAGCG CTTGCGCTTC
AACCCCGGCG CGGCCGAACT CATCGCCGCC GCCAAGGCCG CGGGGCTGGC CACGCTGCTC
GTTTCGGGTG GGTTCACTTT CTTCTCCGAC CGCGTGAAGG CGCACCTGGG GATCGACTTC
GCACGCTCCA ACGTGCTGGA GATCGAGAAC GGCCTGCTCA CCGGTCGCAT GGTGGACCAA
CCCTGGGGCG ACATCTGCGA TGGCGCGGAA AAACGGCGCA CCCTGCTGGA GGTCGCCTCG
CTCATGGGCA TCGACGCGCG CCAGACCATC GCCGTGGGCG ACGGCGCCAA CGACCTGCCC
ATGATGGGCG CGGCCGGGCT GTCCGTGGCC TACCACGCCA AGCCCGCCGT GCGCGCACAG
GCCCGCGTGG CCATCAACCA GGGTGGACTG GACCGGCTGC TGGAAGTGCT GCGCTGA
 
Protein sequence
MSQTPFEFAP GLVVQGITPP LRLADYKLIA FDMDSTLISI ECVDEIADAA GRKAEVAAIT 
EAAMQGLIAD YKESLRQRVA LLKGVGTDHL ERVFTERLRF NPGAAELIAA AKAAGLATLL
VSGGFTFFSD RVKAHLGIDF ARSNVLEIEN GLLTGRMVDQ PWGDICDGAE KRRTLLEVAS
LMGIDARQTI AVGDGANDLP MMGAAGLSVA YHAKPAVRAQ ARVAINQGGL DRLLEVLR