Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3056 |
Symbol | |
ID | 4670668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3223430 |
End bp | 3224377 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639840102 |
Product | lipid A biosynthesis acyltransferase |
Protein accession | YP_987262 |
Protein GI | 121595366 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.605153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGACG CGGAACGCCC GGTCGACCTC GGCCGCCGCC TGCGGCGCGC CCGCCGTCGC GCGCTCTTCC TCGGCCTGCG CACGGTGCTG CGCGTGGCTG GCTTCCAGCG CGTGCGCCTG CTCGGCCAAC TGACGGGCGC GCTGCAGTAC CGGCTGGCCT GGCGCCAGCG CCGGCGCATC GCGCACGACA TGGCCGTGGC GCTCGGCCGC CCGCCCGGCG ACCCGTCGAT CGCGCCGCTG CTGCGCGAGG CCTACCGCGT GAACAACACT GCCGTGCTCG AGATCCTGGC GATGTTCGAC CAGCGCCAGG ACGAGGACAT GCTCATCGCG CGCTGCGAGG TCGACGGCCT CGCGCACCTG CGCACCGCCA TGGCCGGCGG GCGCGGCGCG ATCCTGCTGG CCACGCACAT GGGCAATGCG GCGCTGCTTA CCATCAAGCT GGCCCGCGCC GGCTGGGGCG TGAGCGTGGT CTACCGCGAG GCGCGGATGA TGTCGGCGGG CCTGCTGCAG AACGGGCTCG AGCAGTACGG CATCGAAGGC ATCCTCGCGA ACACCGGTCT GCGCGCCTAC GCCCAGATGG TCTCGGCGTT GAAGCAGGGC CGCATCGTCT TCGTCATGAT GGACCAGGGC GTGCAGCAGG CCGAGACCGG GCTGATGCAG CGCTTCCTGG GCAAGGACGC CGCCATGCCG GCCGGCCCCG CGCAACTCGC CCGCGCGGCG CGTGCGCCGC TGCTGCCGGT GACCACGACG GCGGCCGAGC CGGTCTGGCG CTTCGAGATC CAGCCGCCGG TGCTGTTGGG TCAGGGGTCA CTGGCGTCGG ATGTCGAGCG CCTGGTTCAG CTCACCGAAC AGCAGGTGCG CCAGCATCCG CAGCTGTGGA GCTGGCATCA CCGCCGCTGG CGCAAGCTGC CGCTGGCCAC CACGCCGCCG CCCGTCGCGT CTTCCTGA
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Protein sequence | MSDAERPVDL GRRLRRARRR ALFLGLRTVL RVAGFQRVRL LGQLTGALQY RLAWRQRRRI AHDMAVALGR PPGDPSIAPL LREAYRVNNT AVLEILAMFD QRQDEDMLIA RCEVDGLAHL RTAMAGGRGA ILLATHMGNA ALLTIKLARA GWGVSVVYRE ARMMSAGLLQ NGLEQYGIEG ILANTGLRAY AQMVSALKQG RIVFVMMDQG VQQAETGLMQ RFLGKDAAMP AGPAQLARAA RAPLLPVTTT AAEPVWRFEI QPPVLLGQGS LASDVERLVQ LTEQQVRQHP QLWSWHHRRW RKLPLATTPP PVASS
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