| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3026 |
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| Symbol | |
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| ID | 4672189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3193004 |
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| End bp | 3194056 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639840076 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_987236 |
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| Protein GI | 121595340 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTG ATTTTTCTTC CAAGACGCTG CTGATTACCG GTGGCACGGG CTCTTTCGGC
AATGCCGTCC TGAAACGGTT TCTGGATACG GACATTGCCG AAATCCGCAT CTTCAGCCGC
GACGAGAAGA AGCAGGACGA CATGCGCAAG CGCTACAACA GCGCAAAGCT CAAGTTCTAT
ATCGGCGATG TGCGCGATGC GCGCAGCATC GAGCAGGCCA TGCGCGGGGT GGACTATGTG
TTTCACGCAG CGGCGCTCAA GCAGGTGCCT TCGTGCGAGT TTCACCCCAT GCAGGCGGTG
CGCACCAATG TTCTGGGGAC AGAGAATGTG CTGGAGGCGG CCATTGGCGC GGGCGTGAAG
CGCGTGGTGT GCCTCAGCAC CGACAAGGCC GTGTACCCCA TCAACGCCAT GGGCATCAGC
AAGGCCATGA TGGAAAAGGT GATGGTGGCC GCCAGCCGCA ACCTGGAAGG CACGGGCACG
GTGATTTGCG GCACGCGCTA CGGCAACGTG ATGGCCTCGC GCGGCTCGGT GATTCCGCTG
TTTGTAGAGC AGGCCTTTGC CGGCAAGCAT CTGACACTTA CCGACCCCAC CATGACCCGC
TTCATGATGA CTTTGGCCGA TGCGGTGGAC CTGGTGCTGT ATGCCTTTGA GCATGGCAAT
AACGGCGACA TTTTTGTGCA AAAGGCCCCC GCCGCCACGG TAATGACGCT GGCCAAGGCG
CTGCTGGACT TGATGGGCAA GCCCGATCAT CCCCTGCACA TCATGGGCAC CCGCCATGGC
GAGAAGCTGT ACGAGGCCTT GCTCAGCCGC GAAGAAATGG CCTGCGCCCA AGACATGGGC
GACTATTACC GCGTGCCCGC CGATGGGCGT GATTTGAACT ACGCCAAATT TGTGGAGCAA
GGCGACCAAA AGCTGACCCA AACCACCCGT GGCGAGGACT ACAACAGCCA CAACACCACG
CGCCTTGATG TGGAGGGCAT GAAAAGGCTG CTGCTCAAGC TGGACTTTAT GCAGCAGATT
GCGCGGGGGG AATACGCGGT GGCGGAAGAG TGA
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| Protein sequence | MSIDFSSKTL LITGGTGSFG NAVLKRFLDT DIAEIRIFSR DEKKQDDMRK RYNSAKLKFY
IGDVRDARSI EQAMRGVDYV FHAAALKQVP SCEFHPMQAV RTNVLGTENV LEAAIGAGVK
RVVCLSTDKA VYPINAMGIS KAMMEKVMVA ASRNLEGTGT VICGTRYGNV MASRGSVIPL
FVEQAFAGKH LTLTDPTMTR FMMTLADAVD LVLYAFEHGN NGDIFVQKAP AATVMTLAKA
LLDLMGKPDH PLHIMGTRHG EKLYEALLSR EEMACAQDMG DYYRVPADGR DLNYAKFVEQ
GDQKLTQTTR GEDYNSHNTT RLDVEGMKRL LLKLDFMQQI ARGEYAVAEE
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