Gene Ajs_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2982 
Symbol 
ID4673448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3149119 
End bp3150081 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID639840034 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_987194 
Protein GI121595298 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.311525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTA CCTCAGTGAC GGTGGGCATC GACGTGGCCA AGGCGCACGT GGATGTCTGT 
GTGCTGGGTG CCAAGAGCAG CGCCCAGCGG TTTGACAACG ATGCCGAAGG CCACTCGGCG
CTGGCGGCTG CCCTGCAGCC CCTGGACGTG GGTCTGGTGG TGATGGAGGC CACCGGCGGC
TACGAGGCCG CGTTAGCGTG TGCCCTGCAG GCCACAGGCC TGCCCGTGGC GGTCATCAAC
CCGCGCCAGG CGCGCGACTT CGCCAAATCC ATGGGACGCC TGGCCAAGAC CGACGCGGTG
GATGCGCGCA CGCTGGCCGA GCTGGCAGCG GTGCTGCTGC GCCGCGACGA TCTGCAGCGC
TTCTTGCGCC CCCTGGCCGA TGAGCGCCAG CAGTGGCTCG CGGCCCTGGT CACGCGCAGG
CGCCAGTTGC TGACCATGCT CCATTCGGAG CGCCAACGGC TGCAGATCAC GCCCAAGAAG
CTGCACGCCA GCATCGAGGC CATCGAGGCG GCGATCAAGG CGCAGCTCGA TGAGATCGAA
GAGCAGATGG TCACGCATGT GCGCGAGCAC TTTGGGGAGC TCGACACGCT GCTGCAGTCG
GCTGCGGGAG TCGGCCCGGT GGCCAGTGCC ACGATGATTG CCGAGCTGCC AGAGCTGGGC
CGGCTGAACC GGCGCGAGAT CGCTGCATTG GTGGGCGTGG CGCCCATGGC CAATGACTCC
GGCGGCAGCA AGGGCAGGCG GCGCGTACAA GGCGGGCGCT TCGAGATCCG CCGCGTGCTG
TACATGGCAA CGCTCACGGC CACCCGCTAC AACCCGGCCA TCAAGGCCTT CTACGAGCGT
CTGAAGGCCG CTGGCAAGTT GCCCAAGGTC GCCCTGGTCG CTTGCATGCG CAAGTTGCTC
ACCACGCTCA ACGCCATGGT GCGCACTGGA AAACCTTGGG ACAAGTCGCT TCATTGCGCT
TGA
 
Protein sequence
MSVTSVTVGI DVAKAHVDVC VLGAKSSAQR FDNDAEGHSA LAAALQPLDV GLVVMEATGG 
YEAALACALQ ATGLPVAVIN PRQARDFAKS MGRLAKTDAV DARTLAELAA VLLRRDDLQR
FLRPLADERQ QWLAALVTRR RQLLTMLHSE RQRLQITPKK LHASIEAIEA AIKAQLDEIE
EQMVTHVREH FGELDTLLQS AAGVGPVASA TMIAELPELG RLNRREIAAL VGVAPMANDS
GGSKGRRRVQ GGRFEIRRVL YMATLTATRY NPAIKAFYER LKAAGKLPKV ALVACMRKLL
TTLNAMVRTG KPWDKSLHCA