Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2982 |
Symbol | |
ID | 4673448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3149119 |
End bp | 3150081 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639840034 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_987194 |
Protein GI | 121595298 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.311525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTTA CCTCAGTGAC GGTGGGCATC GACGTGGCCA AGGCGCACGT GGATGTCTGT GTGCTGGGTG CCAAGAGCAG CGCCCAGCGG TTTGACAACG ATGCCGAAGG CCACTCGGCG CTGGCGGCTG CCCTGCAGCC CCTGGACGTG GGTCTGGTGG TGATGGAGGC CACCGGCGGC TACGAGGCCG CGTTAGCGTG TGCCCTGCAG GCCACAGGCC TGCCCGTGGC GGTCATCAAC CCGCGCCAGG CGCGCGACTT CGCCAAATCC ATGGGACGCC TGGCCAAGAC CGACGCGGTG GATGCGCGCA CGCTGGCCGA GCTGGCAGCG GTGCTGCTGC GCCGCGACGA TCTGCAGCGC TTCTTGCGCC CCCTGGCCGA TGAGCGCCAG CAGTGGCTCG CGGCCCTGGT CACGCGCAGG CGCCAGTTGC TGACCATGCT CCATTCGGAG CGCCAACGGC TGCAGATCAC GCCCAAGAAG CTGCACGCCA GCATCGAGGC CATCGAGGCG GCGATCAAGG CGCAGCTCGA TGAGATCGAA GAGCAGATGG TCACGCATGT GCGCGAGCAC TTTGGGGAGC TCGACACGCT GCTGCAGTCG GCTGCGGGAG TCGGCCCGGT GGCCAGTGCC ACGATGATTG CCGAGCTGCC AGAGCTGGGC CGGCTGAACC GGCGCGAGAT CGCTGCATTG GTGGGCGTGG CGCCCATGGC CAATGACTCC GGCGGCAGCA AGGGCAGGCG GCGCGTACAA GGCGGGCGCT TCGAGATCCG CCGCGTGCTG TACATGGCAA CGCTCACGGC CACCCGCTAC AACCCGGCCA TCAAGGCCTT CTACGAGCGT CTGAAGGCCG CTGGCAAGTT GCCCAAGGTC GCCCTGGTCG CTTGCATGCG CAAGTTGCTC ACCACGCTCA ACGCCATGGT GCGCACTGGA AAACCTTGGG ACAAGTCGCT TCATTGCGCT TGA
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Protein sequence | MSVTSVTVGI DVAKAHVDVC VLGAKSSAQR FDNDAEGHSA LAAALQPLDV GLVVMEATGG YEAALACALQ ATGLPVAVIN PRQARDFAKS MGRLAKTDAV DARTLAELAA VLLRRDDLQR FLRPLADERQ QWLAALVTRR RQLLTMLHSE RQRLQITPKK LHASIEAIEA AIKAQLDEIE EQMVTHVREH FGELDTLLQS AAGVGPVASA TMIAELPELG RLNRREIAAL VGVAPMANDS GGSKGRRRVQ GGRFEIRRVL YMATLTATRY NPAIKAFYER LKAAGKLPKV ALVACMRKLL TTLNAMVRTG KPWDKSLHCA
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