Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2964 |
Symbol | |
ID | 4671692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3131303 |
End bp | 3132085 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639840016 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_987176 |
Protein GI | 121595280 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.166977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTTTGA ATCTTGCCAT CACTGACTGG CGCGGCAAGC GCGTGTGGCT GGTGGGCGCC TCCAGCGGTA TTGGCCGGGC CGTCGCAGCG CAATTGCACG CACAGGGCGC GCAGGTGATC GTGTCGGCAC GCCAGCAGGC GCTGCTGGCG GCGTTTGCGC ACGAACACCC TGGCAGCCAA GCAGTGGTGC TGGATGTGAC CGATGCCCAG GCGGTCCTGG ACGTTGCCGC GCGCCTGCAG ACCGAGTCAC CACTGGACCT GGTGTGCTAC TGCGCCGGCC ACTACACCCC CATGCGAGCC GACGCGCTGG CGCTGCCCGA GCTGCTGCGC CACCAGCAGG TCAACCTGAC GGGCGCGCTG CATGTGCTCG CCGCCGTGGT CCCGGGACTC CTGGCATCTG CCCAGGCGGG ACGCGTACCT CACTTGAGTC TGGTGGCCAG TGTTGCAGGC TGGCGCGGTC TGCCGCAGAG CCTGGCCTAT GGACCGACCA AGGCGGCCCT CATCAACCTG GCCGAGACGC TGTTCCTTGA TCTGCGCCCG CAGGGCGTGG GTGTGAGTGT GGTGAACCCC GGCTTTGTCG ATACGCCCCT GACGCGCCAG AACGACTTCA CCATGCCCGC GCTGCTCACG CCGGAGCAGG CGGCCCAGGC CATGTTGCGC GGCTGGGGGA GGGGCGCGTT TGAACTGCAT TTTCCACGCC GCTTCACGCT GTGGCTCAAG CTGCTGCGCG TGCTGCCGTA CCGCTGGTAC TTTCCGCTGG TCCACCGTAT GACCGGGCTG TGA
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Protein sequence | MPLNLAITDW RGKRVWLVGA SSGIGRAVAA QLHAQGAQVI VSARQQALLA AFAHEHPGSQ AVVLDVTDAQ AVLDVAARLQ TESPLDLVCY CAGHYTPMRA DALALPELLR HQQVNLTGAL HVLAAVVPGL LASAQAGRVP HLSLVASVAG WRGLPQSLAY GPTKAALINL AETLFLDLRP QGVGVSVVNP GFVDTPLTRQ NDFTMPALLT PEQAAQAMLR GWGRGAFELH FPRRFTLWLK LLRVLPYRWY FPLVHRMTGL
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