| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2959 |
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| Symbol | |
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| ID | 4671584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3127686 |
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| End bp | 3129020 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639840011 |
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| Product | phage integrase family protein |
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| Protein accession | YP_987171 |
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| Protein GI | 121595275 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0924112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.542634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTCA CCAAGCTCAC CAAGTCGATC GTCGATGCGG CGCAACCCAG CGACAAGGAC
TATGAATTGA GGGACACGAT TGTCCCCGGG TTCCTGTGCA AGGTCACGGC GTCGGGCCGC
AAGATCTTCA TGCTGCACTA CCGCACGAAT TCGGGCGAAC GCCGCAAGCC GAGGATCGGC
CGGTTCGGTG AACTGACCGT CGAGCAGGCG CGCTCGATCG CGCAGGACTG GATGGCCGAC
GTGCGCAAGG GCAGCGACCC CAGCGCAGCC AAGCAGGCGG CACGCCAAGC CCCCACGGTC
AAGGAGCTGT GCACGCAGTT CATCGAGGAG TATTCCAAGA CGCGCAACAA GCCCAGTACG
GTCGCTACCT ACCAAGACCA CATCAATCGG TACATCGTGC CCAAGCTGGG CAAGATCAAA
GTGCCGGAGC TGACCCGCGT GGATGTGGCA GAGGTGATGC GGGACATGGC CAAGATCTCC
TCCACGGCCA ATCGGACTCT GGCCTGTCTG CGCAAGATGT TCAACATGGC CGAGGTCTGG
GGCTACCGAC CCGATGGCTC CAATCCGTGC CGCCATGTGC CGAAGTACCG GGAAAACGGT
GAGACGAGGT ACATCACCGA CGAGGAACTG GCGCGCCTCT ACGCCTATCT GGACCGTGCG
GATGCCGAGG GGTTGGAACA CCCCACGCTG ACGCTGGCGA TTCGCCTGCA GTTCGAGTTC
TCGGCACGCA TGTCGGAAAT CCGAACGCTT CAATGGGCCT GGATCGACTT CGAGAACCGC
CGGGTGGCCT GGCCGGACAG CAAGACCGGT GGCATTTCCA AGCCGATGAG CGAGGTGGCG
CACCAGTTGC TCTCCAACGC CGAGCGCATT GAAGATTCGC CCTACGTGTG CCCCAGCATA
TATGACGGCA ACCTTCCGCT GCCCAGTGGG ACCTACTACA ACTCCTGGCG GCGAATCCTT
CTGCGTGCGA AGGTGCCCCA TGTCGGCACG CATGGCATTC GCCACCGCGC CGCTACCGAC
ATCGCGAATT CCGGTGTTCC CCTGAAGGTC GGCATGGCGC TGACCGCGCA TAAGACGGTT
TCGATGTTCA TGCGGTATGT TCACGCGGAA GATGACCCGG TTCGGGCGGC CGCGGAGAAG
GTGGCTGCCC TGCGCCAGGA AACCATCGGT AGCGCCGTCG TCACCCCCAA CGCGGCGAAG
GAAGCGACAG GCGGGGGCGG GGCTACGCCC ACGAGCTTGG GGAACTATCG GCCGTACCGG
CACCGTAAGG CGCCGACACG CTCGGTGCCG CCCGGCACGA AGCGGGCATC GGCAACGCCC
GAATCGGTAG CTTGA
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| Protein sequence | MTVTKLTKSI VDAAQPSDKD YELRDTIVPG FLCKVTASGR KIFMLHYRTN SGERRKPRIG
RFGELTVEQA RSIAQDWMAD VRKGSDPSAA KQAARQAPTV KELCTQFIEE YSKTRNKPST
VATYQDHINR YIVPKLGKIK VPELTRVDVA EVMRDMAKIS STANRTLACL RKMFNMAEVW
GYRPDGSNPC RHVPKYRENG ETRYITDEEL ARLYAYLDRA DAEGLEHPTL TLAIRLQFEF
SARMSEIRTL QWAWIDFENR RVAWPDSKTG GISKPMSEVA HQLLSNAERI EDSPYVCPSI
YDGNLPLPSG TYYNSWRRIL LRAKVPHVGT HGIRHRAATD IANSGVPLKV GMALTAHKTV
SMFMRYVHAE DDPVRAAAEK VAALRQETIG SAVVTPNAAK EATGGGGATP TSLGNYRPYR
HRKAPTRSVP PGTKRASATP ESVA
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