Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2911 |
Symbol | |
ID | 4673030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3085033 |
End bp | 3086067 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639839968 |
Product | type II secretion system protein E |
Protein accession | YP_987128 |
Protein GI | 121595232 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG TTCCTTCCTT CACCGCCGTT TCACTGGATC GCCGCATCCT GATGCTGCGC ACGGCGATGG GGCCGCTGAT CGCCGCCGCG CTGGAAGACC CGGACGTGGT GGAAATCATG CTCAACCCGG ATCGCACCTT GTGGATCGAC CGGCTTTCGT CGGGTCGCGC GCCGATGGGT GTGGAGCTGT CCGAGGCCGA CGGCGAACGA ATCATCCGGC TGGTCGCGGC CCACGTCGGC GCGGAAGTCC ACCGCGGCCA GCCACTGTTG ACGGCGGAAC TGCCCGAGAC GGGCGAACGC TTCGAGGGCA TCCTGCCGCC CGCTGCGCCG GGGCCGGCCT TTGCGTTGCG CAAGCGCGCC TTTGGCGTGA TCCCGCTGTC GCGCTACATC GAGGACGAAA TGATGACCGC CGCGCAGGCG GGCTTGCTGG TGCGCGCCGT GCGCGAACGC CAGAACATCC TGATCGCCGG CGGGACGAGT ACCGGCAAGA CCACCTTGGC CAATGCGCTA TTGGCCGAGA TCGCCGCCAC GGGCGACCGC GTATTGGTGC TCGAAGACAC GGTGGAGCTG CAATGCGCGG CCCGCGACCA CGTGCCGCTG CGCACACGCC AGGGCGTGGT GTCCATGACC GAGCTGGTGC GATCTTCGAT GCGCCTGCGC CCGGATCGTG TCGTCGTCGG CGAGGTGCGT GGCGCCGAGG CATTGGATCT CATCAAAGTC TGGGGCACTG GCCATCCGGG CGGCATCGCC ACCATCCACG CCGGCTCCGT ACTGGGCGCA CTGCTGCGCC TGGAGCAACT GATTCTCGAA GTGGCGGTGA ACCCGCCCCG TGCGCTGATC GCGGAAGCGG TCAACGTGGT GATCCACATC GCCGGGCGCG GACGCAAGCG CCGCATCGAG AGCATCGCCC GCGTCGTCGG CTTCGATGGC GTGGGCTACC AACTGGCGGA TGCGCTGGAG GCTCCATTCC CGGAGCTGCT GCCGCAGTCC GACCTTTCCT CCCTGTCCCC TGACCACTCT GGAGAACTTC CATGA
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Protein sequence | MSAVPSFTAV SLDRRILMLR TAMGPLIAAA LEDPDVVEIM LNPDRTLWID RLSSGRAPMG VELSEADGER IIRLVAAHVG AEVHRGQPLL TAELPETGER FEGILPPAAP GPAFALRKRA FGVIPLSRYI EDEMMTAAQA GLLVRAVRER QNILIAGGTS TGKTTLANAL LAEIAATGDR VLVLEDTVEL QCAARDHVPL RTRQGVVSMT ELVRSSMRLR PDRVVVGEVR GAEALDLIKV WGTGHPGGIA TIHAGSVLGA LLRLEQLILE VAVNPPRALI AEAVNVVIHI AGRGRKRRIE SIARVVGFDG VGYQLADALE APFPELLPQS DLSSLSPDHS GELP
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