Gene Ajs_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2880 
Symbol 
ID4670723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3052117 
End bp3052947 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID639839937 
Producthypothetical protein 
Protein accessionYP_987097 
Protein GI121595201 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0279638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCCA CGCACACGCG CACCGTGTTC TATATCTCCG ACGGCACCGG CATCACGGCC 
GAGACCTTCG GCAATGCCAT CCTGGCGCAG TTCGACATCC GCCCGCGCCA CGTGCGCCTG
CCCTTCATCG ATACCGAGGA CAAGGCGCAC CAGGTGGTGC GCCAGATCAA CCACACGGCC
GAGCTGGAGG GCAAGAAGCC CATCGTGTTC ACCACGCTGG TGAACATGAG CGTGCTCAAG
ATCATTGAGG ACGGCTGCAG GGGCATGCTG CTGGACATGT TCGGCACCTT CATCCGCCCG
CTGGAGTCCG AGCTGGGCGT GAAGTCACAC CACCGCGTGG GGCGTTTCTC GGACATCAGC
GTGTCCAAGG AATACAGCGA CCGCATCGAA GCCATCAACT TCAGCCTGGA CCACGACGAC
GGCCAGAGCC ACCGCGACCT GTCGGGTGCG GACGTGATCC TGATCGGCGT GTCGCGCAGC
GGCAAGACGC CCACGAGCCT GTACCTGGCC ATGCAGTGCG GCCTGAAAGT GGCCAACTAT
CCACTGATCC CCGAGGACTT CGAGCGCCGC CAACTGCCGC CCGCGCTGGT GCCGCACCGC
AAGAAGATCT TCGGCCTGAC GATCGACCCG CAACGGCTGT CGCAGATCCG CAATGAGCGG
CGCCCCGGCT CCCGGTACGC CGATCTGGTG AACTGCCGCA ACGAGGTGGC CGAGGCCGAG
GCGATGATGC GCCGCTCGGG CATTCGCTGG CTATCCACCA CCACCAAGAG CATCGAGGAG
ATCGCGACCA CCATCCTGCA GGAGGTGCGG CCGGAACGGC TGCAGTACTG A
 
Protein sequence
MLATHTRTVF YISDGTGITA ETFGNAILAQ FDIRPRHVRL PFIDTEDKAH QVVRQINHTA 
ELEGKKPIVF TTLVNMSVLK IIEDGCRGML LDMFGTFIRP LESELGVKSH HRVGRFSDIS
VSKEYSDRIE AINFSLDHDD GQSHRDLSGA DVILIGVSRS GKTPTSLYLA MQCGLKVANY
PLIPEDFERR QLPPALVPHR KKIFGLTIDP QRLSQIRNER RPGSRYADLV NCRNEVAEAE
AMMRRSGIRW LSTTTKSIEE IATTILQEVR PERLQY