| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2860 |
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| Symbol | |
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| ID | 4671498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3031155 |
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| End bp | 3032249 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639839917 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_987077 |
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| Protein GI | 121595181 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.668789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGC AACGCACCCA CAAGATCGCC GTGATCGCCG GAGACGGCAT CGGCAAGGAA
GTCATGCCCG AAGGCCTGCG CGCCGTGCAG GCCGCCGCCC GGCGCTTCGG TCTGAACCTG
GAACTGCACA CCTTCGACTG GGCGCATTGC GACTATTACG CCCGGCACGG CCAGATGATG
CCCGACGACT GGAAGGCGCA GCTGTCGGGC ATGGATGCGA TCTTCTTCGG CGCCGTGGGC
TGGCCGGCGA CCGTACCCGA TCACATCTCG CTGTGGGGGT CGCTGCTGAA GTTCCGCCGC
GAGTTCGACC AGTACATCAA CCTGCGCCCC GTGCGCCTGT TCGAGGGCGT GCCCTGCCCG
CTGGCCGGCC GCAAGCCCGG CGATATCGAC TACTACGTGG TGCGCGAAAA CACCGAGGGC
GAATACACGT CGCTGGGCGG CATCATGTAC GAGGGCACGG ACCGCGAGAT CGTGATCCAG
GAATCGGTCT ACTCGCGCCA CGGCGCCAAC CGCCTGCTGA AGTTCGCCTT CGACCTGGCG
CAAAGCCGCC CGCGCAAGCA CGTGACGCTG GCCACCAAAA GCAACGGTAT CGCCATCAGC
ATGCCCTGGT GGGACCAGCG CGCCGACGAT GTCGCCAAGG GCTATCCCGA AGTCACGCTG
GACAAGCAGC ACATCGACAT CCTCACCGCG CGCTTCGTGC TGCAGCCGGG GCGCTTCGAC
GTGGTGGCCG CCACCAACCT GTTCGGCGAC ATCCTCTCCG ACCTGGGGCC CGCCACCACC
GGCACCATCG GCCTGGCGCC ATCGGCCAAC CTGAACCCCG AGCGCACCTT CCCCAGCCTG
TTCGAGCCCG TGCACGGCTC GGCGCCCGAC ATCTATGGCC AGAACATCGC CAACCCGATC
GCCATGATCT GGTCCGGTGC GCTGATGCTG GACTTCCTGA CCCACGGCCA AGGCGCGGGG
CGGCAGGCCC ACGATGCCAT CGTTGCGGCC ATCGAAGAGA TCATCAAAAG CGGCCCGCGC
ACGCCAGACC TGGGCGGTGC GGCAAGCACC ACGCAGGTGG GCGAGGCCAT CGCCGCGCGC
ATCGCGCACG GGTAA
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| Protein sequence | MQQQRTHKIA VIAGDGIGKE VMPEGLRAVQ AAARRFGLNL ELHTFDWAHC DYYARHGQMM
PDDWKAQLSG MDAIFFGAVG WPATVPDHIS LWGSLLKFRR EFDQYINLRP VRLFEGVPCP
LAGRKPGDID YYVVRENTEG EYTSLGGIMY EGTDREIVIQ ESVYSRHGAN RLLKFAFDLA
QSRPRKHVTL ATKSNGIAIS MPWWDQRADD VAKGYPEVTL DKQHIDILTA RFVLQPGRFD
VVAATNLFGD ILSDLGPATT GTIGLAPSAN LNPERTFPSL FEPVHGSAPD IYGQNIANPI
AMIWSGALML DFLTHGQGAG RQAHDAIVAA IEEIIKSGPR TPDLGGAAST TQVGEAIAAR
IAHG
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