Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2762 |
Symbol | |
ID | 4674064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2925274 |
End bp | 2927643 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639839819 |
Product | ornithine decarboxylase |
Protein accession | YP_986979 |
Protein GI | 121595083 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTC GCTTTCCCAT CGTCATCATC GACGAGGACT ATCGTTCAGA GAACACCTCC GGCCTGGGGA TCCGGGCGCT GGCGCAGGCC ATCGAGGCGG AAGGGTTCGA GGTCCTGGGC GTGACCAGCT ACGGCGACCT GTCGCAGTTC GCCCAGCAGC AAAGCCGCGC CAGCGCGTTC ATCCTGTCGA TCGACGACGA GGAATTCACG CTGGGCACGG GCCAGGATCC CATCGTGCAC AGCCTGCGCG CCTTCATCGA AGAGGTACGC CGCAAGAACG CCGACGTGCC GATCTACGTG CACGGCGAGA CCAAGACCGC GCGCCACCTG CCCAACGACA TCCTGCGCGA GCTGCACGGC TTCATCCACA TGTTCGAGGA CACGCCCGAG TTCGTGGCCA AGCACATCAT CCGCGAGGCC AAGAGCTACC TGGAGGGCGT GCAGCCGCCA TTCTTCAAGG CGCTGCTGGA TTACGCGGAA GACGGCTCCT ACAGCTGGCA CTGCCCGGGC CACTCGGGCG GCGTGGCGTT CCTCAAGAGC CCCGTGGGCC AGATGTACCA CCAGTTCTAT GGTGAGAACA TGCTGCGCGC GGACGTCTGT AATGCCGTGG AAGAACTGGG CCAGTTACTG GACCACAACG GCGCCATCGG CGAGAGCGAG CGCAACGCCG CGCGCATCTT CAACGCCGAC CACTGCTTCT TCGTGACCAA CGGCACGTCC ACCTCCAACA AGATGGTGTG GCACCACACC GTGGCACCGG GCGACGTGGT GGTGGTGGAC CGCAACTGCC ACAAGTCCAT CCTGCACAGC ATCATCATGA CCGGGGCGAT TCCCGTGTTC CTGAAACCCA CGCGCAACCA CTTCGGCATC ATCGGGCCCA TTCCGCAAAG CGAATTCGAG CCCGCGACCA TCCAGGCGAA GATCAAGGCC AACCCGCTGC TCAAGGGCGT GGACGCCAAG AAGGTCAAGC CGCGCGTGCT GACCCTCACG CAGTCGACCT ACGACGGCGT GCTCTACAAC ACCGAGACCA TCAAGGGCAT GCTCGACGGC TACGTCGAGA ACCTGCACTT CGACGAGGCC TGGTTGCCGC ACGCGGCCTT CCACCCGTTC TACGGCAGCT ACCACGCCAT GGGCAAGAAG CGCGCGCGGC CCAAGCAGTC GGTGGTGTAC GCCACGCAGT CCATCCACAA GCTGCTGGCC GGCATCAGCC AGGCCAGCCA TGTGCTGGTG CAGGACAGCC AAACGACCAA GCTGGACCGC CACCTGTTCA ACGAGGCGTA CCTGATGCAC ACCTCGACCA GCCCGCAGTA CAGCATCATC GCCAGCTGCG ACGTGGCTGC GGCCATGATG GAGCCGCCCG GCGGCACCGC CCTGGTGGAG GAAAGCCTGG TCGAAGCGCT GGACTTTCGC CGCGCCATGC GCAAGGTGGA GGACGAGTTC GGCAAGGACG ACTGGTGGTT CAAGGTCTGG GGCCCCGACA AGCTCGCCGA CGAGGGTGTC GGCCGTGCAG ACGACTGGAT CATCCGCGGC GACGCCAAGG GCAAGAAGAA CGGCCCGAGC AAGTGGCATG GCTTCGGCGC GCTGGCCGAC GGCTTCAACA TGCTGGACCC GATCAAGTCC ACCATCGTCA CGCCCGGCCT GAACCTGGAC GGCAAGTTCG ACAAGACCGG CATTCCGGCC AGCATCGTCA CCAAATACCT GTCCGAGCAC GGCGTGGTGG TGGAGAAGAC GGGCCTGTAC TCGTTCTTCA TCATGTTCAC CATCGGCATC ACCAAGGGCC GCTGGAATAC GCTGCTGGCC GCGCTGCAGC AGTTCAAGGA CGACTACGAG AAGAACCAGC CCATGTGGCG CATCCTTCCC GAGTTCTGCC AGCAGCACAA GCGCTACGAG CGCATGGGCC TGAAGGACCT CTGCCAGCAT GTGCACCAGC TGTACGCCAA GTACGACATC GCCCGCCTGA CGACCGAGAT GTACCTCTCG GACCTCACGC CGGCCATGAA GCCCAGCGAC GCCTATGCCC ACATCGCGCA GCGCAAGACC GAGCGCGTGG AGATCGACCA GCTGGAAGGC CGCATCACCA CCAGCCTGAT CACGCCGTAC CCGCCGGGTA TTCCGCTGCT GATTCCCGGC GAGGTGTTCA ACAAGAAGAT CGTGGACTAC CTCAAGTTCT CGCGCGAGTT CTCCAAGCTC TGCCCGGGCT TCGAGACCGA CATCCACGGC CTTGTGGAGA TCGAGGACGA CAACGGCAAC GTGCGTTATT ACGCCGACTG CGTGGCGCAG GGCACGGGCG GCAGCCGTAA GCCCCGCGCC AACGACCCTG AGTCGCTGGT GCAGGTGGGC AGCGACGGCC CGTTTGGCCG CACCATCTGA
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Protein sequence | MKFRFPIVII DEDYRSENTS GLGIRALAQA IEAEGFEVLG VTSYGDLSQF AQQQSRASAF ILSIDDEEFT LGTGQDPIVH SLRAFIEEVR RKNADVPIYV HGETKTARHL PNDILRELHG FIHMFEDTPE FVAKHIIREA KSYLEGVQPP FFKALLDYAE DGSYSWHCPG HSGGVAFLKS PVGQMYHQFY GENMLRADVC NAVEELGQLL DHNGAIGESE RNAARIFNAD HCFFVTNGTS TSNKMVWHHT VAPGDVVVVD RNCHKSILHS IIMTGAIPVF LKPTRNHFGI IGPIPQSEFE PATIQAKIKA NPLLKGVDAK KVKPRVLTLT QSTYDGVLYN TETIKGMLDG YVENLHFDEA WLPHAAFHPF YGSYHAMGKK RARPKQSVVY ATQSIHKLLA GISQASHVLV QDSQTTKLDR HLFNEAYLMH TSTSPQYSII ASCDVAAAMM EPPGGTALVE ESLVEALDFR RAMRKVEDEF GKDDWWFKVW GPDKLADEGV GRADDWIIRG DAKGKKNGPS KWHGFGALAD GFNMLDPIKS TIVTPGLNLD GKFDKTGIPA SIVTKYLSEH GVVVEKTGLY SFFIMFTIGI TKGRWNTLLA ALQQFKDDYE KNQPMWRILP EFCQQHKRYE RMGLKDLCQH VHQLYAKYDI ARLTTEMYLS DLTPAMKPSD AYAHIAQRKT ERVEIDQLEG RITTSLITPY PPGIPLLIPG EVFNKKIVDY LKFSREFSKL CPGFETDIHG LVEIEDDNGN VRYYADCVAQ GTGGSRKPRA NDPESLVQVG SDGPFGRTI
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