| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2682 |
|---|
| Symbol | |
|---|
| ID | 4670994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2846562 |
|---|
| End bp | 2847581 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639839740 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_986904 |
|---|
| Protein GI | 121595008 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.950619 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGG ACCATCGTCT CACCGTTCTG TTCACCGACT TCGCACCAAC GGACCAAGCG
GCGATGCAGC AACGGCTTCC GGCCCACTGG CACGCGCACT TCGTCCAGCG CGAGCACCTG
GTGGCGTCCG ACACCGAAGA TGGGGCGATC GAGGTCCTTT GCGTGTTCGT GCGCACGCGG
GTGGACGAAT CGGTGCTTCG CATGCTGCCG CGCTTGCGGC TCGTCGCCAC CCGCTCCGCG
GGCTTCGACC ACATTGACCT GGAGGCGTGT CGAAAACGAG GCATTGCCGT CTGCCATGTG
CCGGACTACG GGTCGGCCAG CGTCGCAGAG CATGCCTTTG CACTGTTGCT GGGCGTGACA
CGCCATCTGA CGCAGGCCCA CGAGCGGGCG CGCCAGGGCT CGTTCGCCTA CCGCGGACTC
ACCGGCTTCG AGCTGGAAGG CAGGACGCTG GGCATCGTCG GCCTGGGCCG CATCGGACGC
CACGTGGCGC GTATCGCCGT GGGGTTCGGC ATGGACGTTC TCGCCTACGA CCCCGCCTTC
GCTGCTTCGG CTGCGCGCCC AGCTGGCGTG TCCCTCGTGA CATGGGAGCA GGTCCTGCAA
GGCAGCGACA TCCTGAGCCT GCATGTTCCG GCCACCGAGG CCACGCGCCA CCTCATCGAC
GCCCGGGCCT TCGCGCGCAT GAAGCCTGGC GTGGTAGTGA TCAATACGGC ACGTGGAGCG
CTGATCGACG AGGCCGCCTT GCTGCGCGCG CTGGACGACG GCAGTGTCGC AGCCGCCGGC
CTGGACGTGC TGGAGCAAGA AGGCGCGCTG TCTCCCGAGG TGCCCACGGG CTGCGGGGGG
CTCGGTTGCG ATACCGGCTG GATGGCGTCC AGCCCGCTGC TGACCCATCC GCGCGTGCTC
GTGACTCCCC ACGTCGGTTT CAACACGACA GAGGCGATCG CGCGCATCTT CGACGAGACC
ATCTCGAACA TCGCAGCCTG GCATGCGGGC CGGCTGCGCA ACAGGGTGGA TGAGCCGTGA
|
|---|
| Protein sequence | MTEDHRLTVL FTDFAPTDQA AMQQRLPAHW HAHFVQREHL VASDTEDGAI EVLCVFVRTR
VDESVLRMLP RLRLVATRSA GFDHIDLEAC RKRGIAVCHV PDYGSASVAE HAFALLLGVT
RHLTQAHERA RQGSFAYRGL TGFELEGRTL GIVGLGRIGR HVARIAVGFG MDVLAYDPAF
AASAARPAGV SLVTWEQVLQ GSDILSLHVP ATEATRHLID ARAFARMKPG VVVINTARGA
LIDEAALLRA LDDGSVAAAG LDVLEQEGAL SPEVPTGCGG LGCDTGWMAS SPLLTHPRVL
VTPHVGFNTT EAIARIFDET ISNIAAWHAG RLRNRVDEP
|
|---|
| |