| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2649 |
|---|
| Symbol | |
|---|
| ID | 4674153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2818121 |
|---|
| End bp | 2818738 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639839714 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_986878 |
|---|
| Protein GI | 121594982 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0941676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0643152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGAA TCCCCCTGAG CAGACGCTCC CATATCACTG GCTTCCAGCC GGTGCGGCAG
AAGGCCGTCG AACATGAGAG CGCGCTTGAG CGGGACTTCG TGTTGCTTAC CCAATTCCGC
GATCCGGCCG CCGAACTGGT TTCACAGCCC GAGACGATCC ACTTCATGGA CGCGGGCAAG
CCGCGGCGGT ACACGCCGGA CTTCCTGGTG TCCTGGAGCG ACGGGCGACG CGAACTGGTC
GAGATCAAAT ACCGCACGGA CCTGCGCACC CAGTGGGCGA ACCTGCGTCC GGCCTTCGAG
GCGGCACGCG ACTGGGCGCA CGCGAACGGC GCCACCTTCC GCATCGCCAC GGAGCGCGGC
ATTCGTGGCA TGGAGCTGGA AAACGCGCTG CGGTTGATTC CGCTGCGTTC GGCCCCGCTG
GACGTGGCGG CGTGCGATGC CGTGTTGGCT GCGTTGAAGT CGCTGCGCGC GCCGACCATC
GGGCAGCTCG TATCGGCGGT GCGACTTGAG CGCCCGTTGG CGCTCGCCAC CATCTGGCGG
ATGCTCGCGC AGGGGCGCTT GCTGGTCGAT GACCTGTCGG TGGCTCTGCT TGCCAGCAGC
CCCGTGCGGG CGACATGA
|
|---|
| Protein sequence | MRRIPLSRRS HITGFQPVRQ KAVEHESALE RDFVLLTQFR DPAAELVSQP ETIHFMDAGK
PRRYTPDFLV SWSDGRRELV EIKYRTDLRT QWANLRPAFE AARDWAHANG ATFRIATERG
IRGMELENAL RLIPLRSAPL DVAACDAVLA ALKSLRAPTI GQLVSAVRLE RPLALATIWR
MLAQGRLLVD DLSVALLASS PVRAT
|
|---|
| |