Gene Ajs_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2563 
Symbol 
ID4674687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2727931 
End bp2728590 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID639839628 
Producthypothetical protein 
Protein accessionYP_986797 
Protein GI121594901 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0895318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00397879 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTTTTTG CAGCCTTGCC GGCCCCCGGC GGGGCCTTCA CTTGGAATTG GATAGAGCGC 
ACGCACGTGG CATTGCAGCA AATCGTAGAA CAAACCGTGG CCGGGCTGGG CTATGACCTG
GTGGAGATTG AGCGCTCCGC CGGAGGGTTG CTGCGCATTA CCATTGACCT GGTTTGGGTG
CCGCCCACGG ATGAGGTGTC CGCTGCCGTA GGCGCCGAGC AATTCATTAC CGTAGAGGAT
TGTGAAAAGG TCACCCGTCA GTTGCAGTTC GCGCTGGAGG TGGAAGGGGT GGACTACACG
CGGTTGGAAG TCTCATCTCC TGGGATCGAC CGCTTGTTGC GCAACGAGGC GGACTTCAAG
CGTTTCGAGG GCGAGGTGAT CGACATCACC CTCAAGCAGC CCATGGGCGC TGCGGCGGGA
GGGCAAGTGC ATGCCAACCG CAAGAAATTC CGGGGAGCAC TCGAGCGTGC CGATTCGGGC
GGTTGGCAGA TTGTCTGGAG CGATGAGCCG CCCGTGAAGC CGGGGCAGCG CATCAGCAAG
AAGCGCGTGC CAGCGCCTTT GCAGGCCCTT GGTTTCACTT TGGATGAGTT GCGCGAGGCG
CGGCTTGCGC CGATCGTGGA TTTCAAAGGA CGAGGGACCA AGCCTGGGGA GCCGGGCTGA
 
Protein sequence
MVFAALPAPG GAFTWNWIER THVALQQIVE QTVAGLGYDL VEIERSAGGL LRITIDLVWV 
PPTDEVSAAV GAEQFITVED CEKVTRQLQF ALEVEGVDYT RLEVSSPGID RLLRNEADFK
RFEGEVIDIT LKQPMGAAAG GQVHANRKKF RGALERADSG GWQIVWSDEP PVKPGQRISK
KRVPAPLQAL GFTLDELREA RLAPIVDFKG RGTKPGEPG