| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2562 |
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| Symbol | |
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| ID | 4670647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2726377 |
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| End bp | 2727861 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639839627 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_986796 |
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| Protein GI | 121594900 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0312455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00289599 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCGCG AGTTGTTGAT GTTGGTAGAA GCCATTTCGC GCGAAAAGAA CGTGGAGCGC
GATGTGGTCC TGGGCGCTGT GGAGTCTGCT CTGGCACAGG CCACGAAGAA GCTCTACCAG
GGTGAAGTGG ACATCCGCGT GTCGATTGAA CGCGACAGCG GCGAATACGA GACTTTCCGT
CGTTGGCTGG TGGTGCCCGA CGATGCCGGA TTGCAGAACC CCGACGCAGA AGAGCTGCTG
ATGGATGCCC GCGAACGGGT GGCCGATATC GAGGTGGGGG AGTACATCGA GGAAGCCGTC
GAGTCGGTAC CGATCGGCCG CATCGGGGCC ATGGCGGCCA AGCAGGTGAT CCTGCAAAAG
ATCCGCGATG CCGAACGCGA GATGCTGCTC AACGATTTCA TGTCACGCGG CGAGAAAATT
TTCACCGGCA CGGTGAAACG CATGGACAAG GGCGACATCA TCGTCGAGAG CGGCCGGGTG
GAAGGGCGCC TGCGTCGCGG CGAGATGATC CCGAAGGAAA ACCTGCGCAA TGGGGACCGT
GTGCGCGCCA TGATCATGGA GGTGGACCTC ACGCTGCGCG GAGCGCCCAT CATCCTCTCG
CGCTCCGCGC CGGAGTTCAT GATCGAGTTG TTCCGCAACG AGGTGCCCGA GATCGAGCAG
GGTCTGCTGG AGATCAAAAG CTGTGCCCGT GACCCCGGCA GCCGCGCGAA GATCGCTGTG
CTCAGCCATG ACAAGCGCGT GGACCCCATC GGCACCTGCG TGGGCGTGCG CGGAACGCGT
GTGAACGCCG TGACCAACGA ACTGGCGGGA GAGCGCGTGG ACATCGTGCT GTGGTCCGAC
GACCCTGCGC AGTTCGTGAT CGGCGCGCTT GCTCCGGCCA ACGTGACTTC CATCGTGGTC
GACGAAGAGA AGCACGCCAT GGACGTCGTG GTGGACGAGG AAAACCTCGC CATCGCCATC
GGGCGCGGCG GCCAGAACGT GCGCCTGGCG TCCGACCTCA CGGGCTGGAA GATCAACATC
ATGGATGCGG CCGAATCCGC GCAGAAGCAG GCCAATGAAA CCGATGCCGC ACGTCGCCTG
TTCATGGAGA AGCTGGATGT GGATGAGGAG ATCGCCAACA TCCTGATCGA GGAGGGCTTC
GCCAGCCTCG AGGAAGTGGC CTATGTGCCG CTGCAGGAAA TGCTGGAGAT CGAGAGCTTC
GACGAGGACA CGGTGAACGA GCTGCGCGCA CGCGCCAAGG ATGCGCTGCT CACCATGGAA
ATCGTTCGTG AAGAAAGCGT GGAAAGCGTA TCGCAAGACC TGCGTGACCT CGAAGGTCTG
ACGCCCGAAC TGATCGCCAA GTTGGCGGAA GGTGGCGTGC ATACGCGTGA CGACCTGGCC
GATTTGGCCA TTGACGAACT GACCGAGCTG ACCGGCCAGT CTGCCGAAGA TGCGACCGCC
TTGATCATGA AGGCGCGCGA GCACTGGTTC ACGGGGCAAG AGTAA
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| Protein sequence | MNRELLMLVE AISREKNVER DVVLGAVESA LAQATKKLYQ GEVDIRVSIE RDSGEYETFR
RWLVVPDDAG LQNPDAEELL MDARERVADI EVGEYIEEAV ESVPIGRIGA MAAKQVILQK
IRDAEREMLL NDFMSRGEKI FTGTVKRMDK GDIIVESGRV EGRLRRGEMI PKENLRNGDR
VRAMIMEVDL TLRGAPIILS RSAPEFMIEL FRNEVPEIEQ GLLEIKSCAR DPGSRAKIAV
LSHDKRVDPI GTCVGVRGTR VNAVTNELAG ERVDIVLWSD DPAQFVIGAL APANVTSIVV
DEEKHAMDVV VDEENLAIAI GRGGQNVRLA SDLTGWKINI MDAAESAQKQ ANETDAARRL
FMEKLDVDEE IANILIEEGF ASLEEVAYVP LQEMLEIESF DEDTVNELRA RAKDALLTME
IVREESVESV SQDLRDLEGL TPELIAKLAE GGVHTRDDLA DLAIDELTEL TGQSAEDATA
LIMKAREHWF TGQE
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