| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2555 |
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| Symbol | |
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| ID | 4670536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2717336 |
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| End bp | 2718175 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639839620 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_986789 |
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| Protein GI | 121594893 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00539506 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCCCG ACCCTTTCAG TCCTTCGGAC GAGACGCATC TGCATGCTTT GGCGGACGAC
CGGCTGCCGC GCGCCCAGGC AGAGTCGCTG CACTCCCGCA TGGACTCCTC GCAGAGGCAG
CGTGCCGAAG CGTGGGCGCA ACAGCGTGCG CAGCTGCAGA CCCTGCACGC TGACTGGTTG
CGGCAGCCTG TGCCCAATGT GCTGGTACAG GCGGCAGAGC GCCTGCAAGA CGCACACGAC
ACGCAACAGC ACTGGGCCCG TTGGGGCGGC TTTGCCGCGG GCTGGGTGCT GGCGTTCGGG
CTGGGCTGGA GCCTGCATGC GACGGACGGC AAACAAACCA CACTGGCCAC GGCCCCCCCG
CAACGGTTCG TGCAGCAGGC GGCCGTGGCG CACGCGGTCT ACCAACCCGA ACAGCGCCAT
CCTGTGGAAG TGGCGGCCGC GCAGCAGGAC CACCTGGTGC AGTGGCTGTC CAAGCGGCTG
GCGCGCCCGC TCACCGTGCC GCGGCTGCAG GCCGAGGGGT TCGAATTGAT GGGCGGGCGC
CTGCTGCCCG GCGGCAGCGG GGCGCGCGCG CAATTCATGT ACCAGAACGC CGCGGGCGCG
CGAATCACGC TGTACCTGGG CGCACTCGAC GGCCTACAGG CTGCGGCGGC ACCGACCACC
GCGTTCCAGT TCCACGACGA AGGGACCGTG TCCAGTTTCT ACTGGGTGGA CCAGGGTTTT
GGCTACGCCC TCAGCGGCGA ACTGCCGCGG CCCACGCTGC AGGCGCTGGC CACGGCGGTG
TACCAGCAGA TCAGCGCAGC GCCGCCAGCG GGTGCGCGTG CGCCGGCCAA GGGCTCTTGA
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| Protein sequence | MKPDPFSPSD ETHLHALADD RLPRAQAESL HSRMDSSQRQ RAEAWAQQRA QLQTLHADWL
RQPVPNVLVQ AAERLQDAHD TQQHWARWGG FAAGWVLAFG LGWSLHATDG KQTTLATAPP
QRFVQQAAVA HAVYQPEQRH PVEVAAAQQD HLVQWLSKRL ARPLTVPRLQ AEGFELMGGR
LLPGGSGARA QFMYQNAAGA RITLYLGALD GLQAAAAPTT AFQFHDEGTV SSFYWVDQGF
GYALSGELPR PTLQALATAV YQQISAAPPA GARAPAKGS
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