Gene Ajs_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2530 
Symbol 
ID4672728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2696611 
End bp2699397 
Gene Length2787 bp 
Protein Length928 aa 
Translation table11 
GC content59% 
IMG OID639839597 
Productputative DNA methylase 
Protein accessionYP_986766 
Protein GI121594870 
COG category[V] Defense mechanisms 
COG ID[COG1002] Type II restriction enzyme, methylase subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0253553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000494571 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGCCG TAGAAATCGA ACAAGCCATC ACCGACCTCG CGGAGCAGCC GTTCGACCGT 
GCGGAGTTCC CCTATGCCTT CCTTGAGGCG TTCGGCAACA AAGCGACGAC CATCAAGCGC
CTGCGCGCGG GGGCGTCGAA CAAATCCGAT CTGGGCGGTG TTCTCCAGAC CAGCAACATC
CATATCCTGA CCTGCGATGC GGGCCAGGTC ACAGCGACGC TCAAGGCCCT CAAAGACAGC
TCGGCCACTG CCAAGGCCAA GGCTAAATTC GTGCTCGCCA CCGACGGCGT GGACTTCGAG
GCCGAAGACC TGACCAGCGG CGAGACCGTC GCCTGTGCCT TCAAGGACTT CCCGGATCAC
TTCGGTTTCT TCCTTCCGTT GGCGGGCATC AGTACCGTCC GCCAGATCAG CGAAAACGCC
TTCGACATCC GGGCCACCAG CCGCCTGAAC CGCCTGTATG TCGAACTGTT GAAAGACAAC
CCCGAATGGG GCGCGGCAGA GCGTCGCCAC GACATGAACA AGTTCATGGC GCGGCTGATC
TTCTGCTTCT TCGCCGAAGA CACCGACATC TTCATCGGCA AAGGGCGCTT CACCGAAACC
GTCGCGCAGA TGAGCGCCAA GGACTCCTCC AACACGCACG AGGTCCTCGC CACGCTGTTT
CGCACCATGA ACACCAAGCG CGAGGACCGG GCAGCAGCCA AGATTCCCCG GTGGGCCGAA
GACTTCCCCT ACGTCAACGG GCAGTTGTTC TCCGGCGGCG ACGAGGTGCC GCGATTCAGC
AAGATTGCCC GGTCCTACCT GCTGCACGTC GGCGGTCTGG ACTGGACCAA GATCAACCCG
GACATCTTCG GCTCGATGAT CCAGGCCGTT GCCGAGGACG AGGAGCGCGG CGAGCTGGGG
ATGCACTACA CCAGCGTTCC CAACATCCTG AAGGTGCTGA ATCCGCTGTT CCTCGACGAC
CTGCGGGCGA AGCTGGAGGA AGCGGGCGAT AACGCCCGCA TGTTGCTCAA CCTGCGCAAG
CGCATCGCCA AGATCAGGGT CTTCGACCCG GCCTGCGGTT CGGGCAACTT CCTGGTCATC
GCCTACAAGG AAATGCGCGC CATCGAGGCC GAGATCAACC AGCGGCGCGG CGAGCCGGAT
CGAGCATCAG AAATCCCGGT CACCAATTTT CGCGGGATCG AGCTACGCGA CTTCCCGGCG
GAGATCGCCC GCCTTGCGTT GGTCATCGCC GAGTATCAGT GCGATGTGCT GTACCGGGGC
CAGAAGCTGG CGTTGGCCGA GTTTCTACCT CTACGCAATG AAAACTGGAT TACCTGCGGC
AACGCGCTGC GGCTCGACTG GTTGAGCATC TGCCCGCCGA CTGGAACCGG CGTGAAGGTG
CAGGCCGATG ATCTCTTTGG CACGCCGCTA GACCAAGCCG AGATCGACTT CGAGAACGAA
GGCGGCGAAA CGTACATCTG CGGCAATCCG CCATACAAGG GGAGCCAAAC CCAAACCAAG
GAACAAAAGG CGGACCTTGC CAACGTCTTT GAATCTCACG GAACTTCCGC AAAACACCTT
GACTATGTAT GCGGCTGGTT CTTGAAAGCC GCCGAATACG GACGCACAAC CAAGACGGTG
GCGGCATTCG TGTCCACAAA TTCGATATGC CAGGGGCGAC AGGTGGAGAC TCTCTGGTCG
CTCATCTTTG CAACAGGACA TGCAATCTCC TTCGCTCACT CGTCTTTCAA ATGGGCGAAT
CTCGCCAGCT ACAACGCCGG AGTCACGGTC GTCATCGTCG GTATTTCAAA TTATGGCGGT
CGCACTCGGT TGCTCTACTC CGATACTAAT GACGCTGGAA CAACAATAAA GGCCGTCGAG
AATATCAACG CCTATCTCGT TCCGGCGCAG AACATCATGG TGGGGCAACG CTCGGAACCT
TTGGGCGATT TGCCGGCGAT GACCTTCGGC AACATGCCCA ACGACGGCGG GCATCTCTTG
CTCGATACTC AAGAGGCAAG AGATGCTGTG ACAACGCACG GTGTCCCACC GGAGTTCCTT
CGCCCTTTCA TGGGGTCTGA TGAGTTCATT AACGGCGTGG AGCGCAGGTG TATTTGGGTT
GATGACAGCG ACTACGTTCG TGCCAAGGCT AACAAGTGGC TCAGCCGCCG CTTTGATTCC
GTTGAAGACA AGCGTCGAAA AAGCAGCCGA GCAGCAACCG CTAAGCTTTG TAGCGTGCCA
TTCCGATTTG GTGAAGTACG TCAGTCTGGC ACTGAAACGG CTATTCTTGT GCCAAGCGTC
TCATCCGAAA GTCGAGAGTA CCTTCCCGTA GGTTTTGCGC CGTCAGGCGC AATTATTAGC
AATCTTGCTT TTGCCCTCTA CGACGCTCCC CTCTGGAATC TCGCGCTGAT CGCCTCTCGG
CTTCATCTTG TCTGGATCGC CACCGTCTGC GGCAAGCTGG AAACGCGCTA CCGCTACTCC
AACACCCTCG GTTGGAACAC CTTCCCGGTG CCGACGCTGA CGGAGAAGAA CAAGACCGAC
CTCACACGCT GCGCCGAGGA CATTCTGCTG GCACGCGAGC ACCATTTCCC GGCCACCATC
GCCGACCTCT ACGACCCCGA GAAGATGCCC GCCGACCTGC GGGCAGCTCA TGATCGCAAC
GACGAAGTTC TGGAGCGCAT CTACATCGGC CGTCGCTTCA AGAACGACAC CGAGCGGCTG
GAAAAGCTGT TCGACCTCTA CACCAAGATG ACCGCTTCGG CTGCACCGGC TAAGGGCAAG
AAGCGCAAAG CGGGAGCCAA CGCATGA
 
Protein sequence
MNAVEIEQAI TDLAEQPFDR AEFPYAFLEA FGNKATTIKR LRAGASNKSD LGGVLQTSNI 
HILTCDAGQV TATLKALKDS SATAKAKAKF VLATDGVDFE AEDLTSGETV ACAFKDFPDH
FGFFLPLAGI STVRQISENA FDIRATSRLN RLYVELLKDN PEWGAAERRH DMNKFMARLI
FCFFAEDTDI FIGKGRFTET VAQMSAKDSS NTHEVLATLF RTMNTKREDR AAAKIPRWAE
DFPYVNGQLF SGGDEVPRFS KIARSYLLHV GGLDWTKINP DIFGSMIQAV AEDEERGELG
MHYTSVPNIL KVLNPLFLDD LRAKLEEAGD NARMLLNLRK RIAKIRVFDP ACGSGNFLVI
AYKEMRAIEA EINQRRGEPD RASEIPVTNF RGIELRDFPA EIARLALVIA EYQCDVLYRG
QKLALAEFLP LRNENWITCG NALRLDWLSI CPPTGTGVKV QADDLFGTPL DQAEIDFENE
GGETYICGNP PYKGSQTQTK EQKADLANVF ESHGTSAKHL DYVCGWFLKA AEYGRTTKTV
AAFVSTNSIC QGRQVETLWS LIFATGHAIS FAHSSFKWAN LASYNAGVTV VIVGISNYGG
RTRLLYSDTN DAGTTIKAVE NINAYLVPAQ NIMVGQRSEP LGDLPAMTFG NMPNDGGHLL
LDTQEARDAV TTHGVPPEFL RPFMGSDEFI NGVERRCIWV DDSDYVRAKA NKWLSRRFDS
VEDKRRKSSR AATAKLCSVP FRFGEVRQSG TETAILVPSV SSESREYLPV GFAPSGAIIS
NLAFALYDAP LWNLALIASR LHLVWIATVC GKLETRYRYS NTLGWNTFPV PTLTEKNKTD
LTRCAEDILL AREHHFPATI ADLYDPEKMP ADLRAAHDRN DEVLERIYIG RRFKNDTERL
EKLFDLYTKM TASAAPAKGK KRKAGANA