| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2526 |
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| Symbol | |
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| ID | 4673227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2689533 |
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| End bp | 2690708 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639839593 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_986762 |
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| Protein GI | 121594866 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000101247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAAACCA CAGAGCTGAT CGACCTGCTC AGCCGGGGCG AGGACAGTCG GCAGCAGTTC
AAGACGGACA TGAACAATGC CGACGCCTTG GCAGCGGAGA TTGTTGCCTT CAGCAACACC
GCTGGTGGTC GCATCTTCAT TGGGGTGAAC GACGACGGTT CGGTGCGCGG ACTATCCGGC
GCCGACGTTG CTCGTCTCAA CATGCTCATC GCCAACGTGG CCTCACAGGT CGTGCGTCCC
GCCGTGAACC CGCTCACGGA AAACGTGCCC CACCCGGCAG GCACGGTGCT GGTGCTGTCC
ATCGCTGAAG GCGTCAACAA GCCCTACATG GACAAGAACG GCGCGATTTG GGTGAAGAAC
GGCTCGGACA AGCGCCGCGC GACCTCGCGC GAGGAATTGC AGCGTCTGTT CCAGCAGGCG
GGCTTGGTGC ACGCCGACGA AACGCCCGTG GCGGGCTTGA GCGCGGGCGA TGTGGACATG
CCCTATTTCG AAACCTTCTT CGAGCAGCAA TTCGGTGAGC CGCTCGCCCA GCATAACCAG
CCGTTGCCGC AGTTGCTGAC CAACATGAAC CTGATGAACC AGGGGCAGCT CAACGTGGCG
GGCGGTCTGC TATTCGCCAA ATCACCGCAC TACGCGCTAC CCGCCTTCAT CGTCAAGGCC
GTCGCCTTTG TCGGCACCCA GATTGAGGAC GAACGCTACA TCGACAGCCG TGACATCGCC
GGCAAGCTGG CTGACGTGTT CCAGCAGACG CTGGGCTTTA TTGTCGCCAA CACCCGCGCT
GCGCAGGGCG AACAGGGCTT CAACTCCCCG GGGCAGCCTG AGATTCCCCG CATCGTCTGG
GAAGAGCTGG TCGCCAACGC CCTCATTCAC CGCGACTACT TCGTCAGCGC GCCGATCCGC
GTACTGGTGT TTACGGATCG GGTCGAAATC ATCAGCCCCG GCCACCTACC TAACAACCTA
ACGATCGAGA ACATCAAGGC CGGCAACTCA AATATGCGCA ACCCCATCCT GGCGTCCTTT
GCCGCCAAGC TCCTCCCTTA TCGCGGATTG GGTAGCGGCC TGCTGCGCTC ACTGCGGGCA
TGGCCGCAGA TCGAACTCAT CGATGATCGG GCCGGCAATC TGTTCAAGGC TATTGTGGCG
CGTCCCAGTG TGCTGGAGCC GGCCGGAAGA TCTTGA
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| Protein sequence | METTELIDLL SRGEDSRQQF KTDMNNADAL AAEIVAFSNT AGGRIFIGVN DDGSVRGLSG
ADVARLNMLI ANVASQVVRP AVNPLTENVP HPAGTVLVLS IAEGVNKPYM DKNGAIWVKN
GSDKRRATSR EELQRLFQQA GLVHADETPV AGLSAGDVDM PYFETFFEQQ FGEPLAQHNQ
PLPQLLTNMN LMNQGQLNVA GGLLFAKSPH YALPAFIVKA VAFVGTQIED ERYIDSRDIA
GKLADVFQQT LGFIVANTRA AQGEQGFNSP GQPEIPRIVW EELVANALIH RDYFVSAPIR
VLVFTDRVEI ISPGHLPNNL TIENIKAGNS NMRNPILASF AAKLLPYRGL GSGLLRSLRA
WPQIELIDDR AGNLFKAIVA RPSVLEPAGR S
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