| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2426 |
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| Symbol | |
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| ID | 4671374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2579272 |
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| End bp | 2581842 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639839494 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_986663 |
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| Protein GI | 121594767 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00467654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.444529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAG ACGAGCAGCG AATCAAAGAG GCTGCAGAAG CTCTATTCCT CATAGAGCAT
CAAATGTTCG CCGCTAACCT AGGTTTAATC GAACACAGCG GGGAACTACT CGACGATCAA
TCATTGATTA GCGATCTCGT ATTTTCGATT GATGAACTTG CTTGGTCCAA CGAAACGGAG
GACCGGCGCT TGGCGATTCA AATGATTGCA CTGACCTGGG AGCACGCAAC CTCAAGTCTC
AGAGCAAGAA TGCGGGAGTT TTTTATCCTC TCGCTTTCTA GGTTAGGGGT TGCTCCCTCT
ACCCAAATGA TTGACCTCGA ATTTAAGAGG AGTTCCCATT ATGCGGGCAT CAGCAGTTTT
CGCAGCAAAC TTGCGACTGT TTCGATGCAA ATTCAGTCGC AGCTACTGAT AGGCGAAATT
CGCTATCAAC TAACTGAATT TCAAAAAAGA GCATGGGATG CATTCTCCAG ATCGCCGTAT
GTAGGTATTT CTGCGCCTAC ATCAGCGGGA AAATCATTCG CAATTTATCT TCTAATAGTA
GATTCGGCGC TTCGCTCAGG ACTGCCGTCT GTCTACATTG TGCCTACGAT CAGCCTGGTG
AATCAGGTCA CGGCGGACCT GACGGAGTTG CTGGATGCAC ACGGTCTTAC AAATTGGGGC
GTATCCACCT CGTATAACGC GAATCAATCG AACACGCTAT TCGTACTGAC TCAAGAGAGG
GCAATTCTTG CCATTGAGCG CGGGTTATCA GCGCAAAATC TTGAGATTTT AGTTATCGAT
GAGGCGCAAA ATCTCGAGAA GGTCGGTGAT GACGACGAGA CCAGATCGAA GATCCTATTT
GACTTTTTGC ATGATATGCG GGAGATGCGT TCAGCAAACA AAATTATCCT GAGCGGACCA
CGGCTGGAGA ACATTGGATT GGTTGGGGAA GCAGTCTTCG ACACTGATTT CGCTGAAGAG
CGAGCATTGG AATCCCCAGT TGCGTCCATC ACTTACGCCG TTGAGCAGCG AGGCAACGAT
TTTTATCTCA ATCAATTTCG AAACTCGCTG AGCGAAAAGT CTTCTTTGAA GATTGAAGAT
GCTGAGAGAG TTCAGGGACT ACTGTCGAAA GGGTATGGAG AGGAATACTA TACAACTTTG
GCCGCACTCG TAGATTCGCT CGGAGATACA TCGAAAAATC TCATATTCTG TCCAACAACC
GACCAAGCAC GAAAGGTTGC CACAAGACTC CCAGGTTTTC GCGAGCGACC ACCAGGCGAA
CAAGCCTTAC AAGAGTTATC TCAGTATCTC GCGGAGGCAA TTCACCCGCG GCATCGTCTT
GTTGAACTCG TGCAGCGTGG GGTTGCATTC CATTCAGGGT CGCTTCCACC ACACGCGAGG
TTAGTGGTAG AGCAAGCATT TTCCGATGGC CTTCTGAAAG ATGTTGCTTG TACAACAACT
TTGATGCAGG GCGTGAACTT GCCCGCAAAA AACGTATTTA TTAGAAATCC AAATCTGTTC
GTACGACGTA GAGCCGGAAG CGAAAATGCG GAACTCACAG AGTATGAGTT TGCTAATCTG
CGAGGACGAG CCGGAAGATT GCTGCGAGAT TTTGTAGGGC GAACTATTGT TCTGAACGAA
GAAGCGTTCA GAACCGTCGG CGATCAGCAG GACGATTTGT TTAAGGATAC TTATAAGTCG
TTGCGACTGA CTTATGCAGA CATTCTGGAG CGCAATCGAG AAGAAATATT TTCAGAACTT
CAGGTCGTTG GAACTGCGAA TTCACAGGGT GCTAAGTTTA TCTCTGCCTA TGTGCGCCAG
CAATTGTTTC GGGATGGCCT GAACGCGCCT GCGCGACTGC AAAGTGTCGG CTTGGAACTT
CCCGCAGACA TCTTACAAAA AGTTGGACAT GCGCTAAAGG GCCTAACCAT TAGGCGAGAA
ACAATTCTAG AGAATCGTTA TTGGGATCCG TTTGACTTGC AGAAGATTTC TGATGAGCTG
TCTGCACAAA AAATTGAAAA ATTACCGGAA ACTGCGTGGC AGGCAAGAGT GCCTGCACTT
ATCAAATTGC TTGAACTTCT GGAAACGTTA TGCCCTAACT ATTTTAGGCG ATTTTTAGGC
GACGTCTCAT CTAACAGATT TTTGATGGCT CTTGTTTTGA GTGGCATTAG CTGGGCGCGC
GAGACCCCCT TGCGAACTAT ACTGGAAGAT CGGAAATTCA ATGATGATGC AAATTATGAA
GGCAATATCG ATGATCAAAT CGAAATCATC TATCGAAAAG TTGTTTATGG GTTACCAGCG
CTTTTGAAGC CAATTGCAAG CATTCAGGGT CAGGGCACCG CTTTTCTTGC ATCCCTTGAA
TCAGGAGCCT ATCATCCGGT GACACATTAT TTATTGTCTC TCGGGCTCTA CCGAGAGACA
GCTGTGTACC TCAAGCGAAG AAATTTCGGC CAGATCAGAG GCGACGACCC AAATTTGACG
TCTTTGGTAG ATGAGCGAGT GCCGAGCTCT TTGCAAGGAT TGAATAGATG GACTTCGAGG
CAGGTCGAAA TAACCCTTAA AAGGAAACTA CGGAGGAATG CAAATGGGTA A
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| Protein sequence | MIKDEQRIKE AAEALFLIEH QMFAANLGLI EHSGELLDDQ SLISDLVFSI DELAWSNETE
DRRLAIQMIA LTWEHATSSL RARMREFFIL SLSRLGVAPS TQMIDLEFKR SSHYAGISSF
RSKLATVSMQ IQSQLLIGEI RYQLTEFQKR AWDAFSRSPY VGISAPTSAG KSFAIYLLIV
DSALRSGLPS VYIVPTISLV NQVTADLTEL LDAHGLTNWG VSTSYNANQS NTLFVLTQER
AILAIERGLS AQNLEILVID EAQNLEKVGD DDETRSKILF DFLHDMREMR SANKIILSGP
RLENIGLVGE AVFDTDFAEE RALESPVASI TYAVEQRGND FYLNQFRNSL SEKSSLKIED
AERVQGLLSK GYGEEYYTTL AALVDSLGDT SKNLIFCPTT DQARKVATRL PGFRERPPGE
QALQELSQYL AEAIHPRHRL VELVQRGVAF HSGSLPPHAR LVVEQAFSDG LLKDVACTTT
LMQGVNLPAK NVFIRNPNLF VRRRAGSENA ELTEYEFANL RGRAGRLLRD FVGRTIVLNE
EAFRTVGDQQ DDLFKDTYKS LRLTYADILE RNREEIFSEL QVVGTANSQG AKFISAYVRQ
QLFRDGLNAP ARLQSVGLEL PADILQKVGH ALKGLTIRRE TILENRYWDP FDLQKISDEL
SAQKIEKLPE TAWQARVPAL IKLLELLETL CPNYFRRFLG DVSSNRFLMA LVLSGISWAR
ETPLRTILED RKFNDDANYE GNIDDQIEII YRKVVYGLPA LLKPIASIQG QGTAFLASLE
SGAYHPVTHY LLSLGLYRET AVYLKRRNFG QIRGDDPNLT SLVDERVPSS LQGLNRWTSR
QVEITLKRKL RRNANG
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