Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2420 |
Symbol | |
ID | 4671367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2568027 |
End bp | 2571602 |
Gene Length | 3576 bp |
Protein Length | 1191 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639839488 |
Product | delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase |
Protein accession | YP_986657 |
Protein GI | 121594761 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.340967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.812309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGG ACATCCAGGC GCGTGCCCTG CGCCTGGCGC AAGGGCTGCG CCAGCGCGAA CATGCCAGCG GCCGGTCCGG CCTGGTACAG GGGCTGCTGC AGCGGTTCGC GCTGTCCTCG CAAGAAGGCG TGGCGCTGAT GTGCCTGGCC GAAGCGCTGC TGCGCATTCC CGACGCGGCC ACGCGCGACG CGCTGATCCG CGACAAGATC GGTACGGGCG ACTGGGCCGC GCACCTGGGC AAGAGCCCGT CACTGTTCGT CAATGCGGCC ACCTGGGGCC TGCTGCTCAC CGGACGGCTG GTGACCACAC ACAGCGAAGG GGGCTTGAAG GATGCGCTGC GCCGCATCAC CGCACGCGGG GGAGAGCCGC TGATCCGCAA GGGTGTGGAC GTCGCCATGC GCATGATGGG CGAGCAGTTC GTCACCGGCG AGACCATCGA ACAGGCGCTG GGCAAGGCGC GCACCCTGGA GGCACGGGGC TTTCGCTATT CCTACGACAT GCTGGGCGAG GCCGCGCTCA CGGGGCACGA CGCCGATCGC TACATGCAGT CCTATGTGGA TGCCATCCAC GCCATCGGCC GCGCCAGCGC GGGCCGCGGC GTGTACGAAG GGCCCGGCAT TTCCATCAAG CTCAGCGCGC TGCACCCGCG CTACGCCCGC GCGCAGTGGC AGCGCGTGAT GGACGAGCTG TACCCGCGCG TGCTGCAACT GGCGGAACTG GCGCGCGGCT ATGACATCGG CCTGAACATC GACGCCGAAG AGGCCGACCG GCTGGAACTG TCGCTGGACC TGCTGGAGCG CCTTTGCCAT GCGCCGTCCC TCGCGGGCTT CAAGGGCATC GGCTTCGTGA TCCAGGCCTA CCAAAAGCGC TGCCCGCGCG TGATCGACTA CTGCATCGAT CTGGCGCGCC GCAGCGGCCA CCGCCTGATG ATCCGGCTGG TCAAGGGCGC GTACTGGGAC AGCGAGATCA AGCGCGCCCA GGTCGATGGC CTGGCGGACT ACCCCGTGTA CACGCGCAAG GCGCACACCG ATATTTCCTA CATCGCCTGC GCACGCAAGC TGCTGGGCGC ACCCGACGCG GTGTACCCCC AGTTCGCCAC GCACAACGCG CAGACGCTGG CCACCATCTA TGAGCTGGCG GGCCCCGCGG ACTATCGCCC CGGCCAGTAC GAGTTCCAGT GCCTGCACGG CATGGGCGAG CCGCTGTACG AGCAGGTGGT GCCCGAGCGC CCCTGCCGCA TCTACGCCCC GGTGGGTACG CATGAAACGC TGCTGGCGTA CCTGGTGCGC CGCCTGCTGG AAAACGGCGC CAACACCTCG TTCGTGAACC GCGTGGCCGA CGCCACGCTG CCGCTGGAGG CGCTGATCGA CAACCCCGTG GACACGGTGG ATGCCGAGGC CCGCGCCGAA GGCGGCGCCG GCCTGCCGCA CCCGCGCATC GCGCTGCCCC CGCAGCTCTA CGGCCCGGCG CGTGCCAATT CGCAGGGCCT GGACCTGGCG GCCGAGCCCA CGCTGCAGTG CGTGGCCGAC GCGCTGGCCG CCAGCGCCGC CACGCCGCTG GAAGCCACAC CCCTCATCGC CGCCGGCGCT CCCGCCGGCC CGCGCGTCCC CGTGCGCAAC CCTGCCGATG CCACCGATAT GGTCGGGCAG GTGCAAGAAG CCACCACCGC CGATGTGGAC GCCGCGCTGC GGGCTGCCGC CGCGGCGCAG CCCGCCTGGG CTGCCACGCC ACCCGCAGAA CGTGCACGGC TGCTGCGCGC TGCGGCCGAT GGGCTGGAAC GCGATATGCC TGCCCTGCTG GCCCTGCTGA TGCGCGAAGC CGGCAAGACC TGCGCCAACG CCGTGGCCGA GGTGCGCGAG GCGGTGGACT TCCTGCGCTA TTACGCGGCG CAGGTGGATG GGCACTTCGA CAACGCCACC CACCCGCCGC TGGGGCCGGT CACCTGCATC AGCCCCTGGA ACTTCCCGCT GGCCATCTTC ATGGGCCAGG TGGCCGCCGC ACTGGCCGCA GGCAATGTAG TGCTGGCCAA GCCGGCAGAA CAAACGCCCC TCATTGCCTG CCAGGCCGTG CGCCTGCTGC ACCAGGCCGG CGTGCCTGCC GCCGCCGTGC AACTGCTGCC CGGCAGCGGC GAGACGGTGG GCGCGGCGCT GGTGGGCGAC GCGCGCGTGA TGGGCGTGAT GTTCACCGGC TCCACCGAGG TGGCGCGGCT GCTGCAGCGC AGCCTGGCCG CACGGCTGGA CGCCAGCGGC CGGCCCATTC CGCTGATTGC GGAGACAGGC GGGCAAAACG CCATGGTCGT GGACTCCTCC GCCCTGCTGG AGCAGGTGGT CGCGGACGTG CTCACCTCGG CCTTCGACAG CGCGGGCCAG CGCTGCTCCG CCCTGCGCGT GCTGTGCGTG CAGCGCGACT GCGCGGACCG CCTGCTGCAG ATGCTGCGCG GCGCCATGCA GGAACTGCAC ATGGGCAACC CCACGCAACT GGCGGTGGAC GTAGGCCCGG TGATCGACGA GGAGGCGCGC GCCACGATCG CGCGCCACAT CGAGCGCCTG CGCGCCAGCG GCCGGCCGGT GTTCCAAAGC CATGCCGGTG GGCAGGGCAC GGCGCATGGC ACCTTCGTGC CGCCCACGCT GATCGAGCTG AACAGCATCA CCGAGCTGGA GCGCGAGGTC TTCGGCCCCG TGCTGCACGT GGTGCGCTAC GAGCGCGACG AGCTGGACAC GCTGCTCGCG CAGATCAGCG CCACGGGCTA CGGCCTCACC CAGGGCCTGC ACACCCGCAT CGACGAAACC GTGGCCCAGG TGCTGGCCCA CAGCACGGCC GGCAACGTCT ATGTGAACCG CAACATGGTG GGCGCCGTGG TCGGCGTGCA GCCTTTCGGC GGCGAGGGCC TGTCGGGCAC GGGCCCCAAG GCAGGCGGCC CGCTGTATCT GCTGCGCCTG CTGTCGCGCC ACCCGGCCAA CGCCACGCAC GGCGCGCTGG CGGCGACGGC CGTGCAGGTG CCCGACGCCA GCGCACAGCC CGCGCTGCTC GCCCCGCTGT CGGCGCTGGA GCACTGGGCC CAGGCGCAAG GCAACGCAGC GCTGGCACAG GCCTGCGCGG CCCAGGCGCA GGCCAGTTGC GCGGGCCTGG CCTGCACCCT GCCCGGCCCC ACCGGCGAGC GCAACACCTA TCGGCTGCTG CCGCGCGAAC GCGTGCTGTG CCTGGCCGAT ACGGACGAGG CGCTGCTGCT GCAGTTGAGC GCGGTGCTGG CCGCGGGCGC GCTTGCGCTC TGGCCGCAGG ACGCGCAGGC CCTGTGCGCC ACGCTGCCGA GCGAGGTGCA GGCGCGCATC GCCCTGGTGT CCGACTGGCG CGGCGATGGC CTGGGCTACG ACGCCGTGCT GCACAGCGGC AGCCCGGAAA CGCGCCGCGT GGAATGCCAG CGCGTGGCCC TGCGCCCCGG CCCCATCGTG GGCGTGACGG CGATGGACGG CGCCGCCGAT GCGCTGCAGG CGCCCCTGCG CCTGTTGCTG GAGCGCGCGG TCAGCATCAA CACCACGGCG GCAGGCGGCA ATGCCAGCCT GATGACCATG GCGTGA
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Protein sequence | MAQDIQARAL RLAQGLRQRE HASGRSGLVQ GLLQRFALSS QEGVALMCLA EALLRIPDAA TRDALIRDKI GTGDWAAHLG KSPSLFVNAA TWGLLLTGRL VTTHSEGGLK DALRRITARG GEPLIRKGVD VAMRMMGEQF VTGETIEQAL GKARTLEARG FRYSYDMLGE AALTGHDADR YMQSYVDAIH AIGRASAGRG VYEGPGISIK LSALHPRYAR AQWQRVMDEL YPRVLQLAEL ARGYDIGLNI DAEEADRLEL SLDLLERLCH APSLAGFKGI GFVIQAYQKR CPRVIDYCID LARRSGHRLM IRLVKGAYWD SEIKRAQVDG LADYPVYTRK AHTDISYIAC ARKLLGAPDA VYPQFATHNA QTLATIYELA GPADYRPGQY EFQCLHGMGE PLYEQVVPER PCRIYAPVGT HETLLAYLVR RLLENGANTS FVNRVADATL PLEALIDNPV DTVDAEARAE GGAGLPHPRI ALPPQLYGPA RANSQGLDLA AEPTLQCVAD ALAASAATPL EATPLIAAGA PAGPRVPVRN PADATDMVGQ VQEATTADVD AALRAAAAAQ PAWAATPPAE RARLLRAAAD GLERDMPALL ALLMREAGKT CANAVAEVRE AVDFLRYYAA QVDGHFDNAT HPPLGPVTCI SPWNFPLAIF MGQVAAALAA GNVVLAKPAE QTPLIACQAV RLLHQAGVPA AAVQLLPGSG ETVGAALVGD ARVMGVMFTG STEVARLLQR SLAARLDASG RPIPLIAETG GQNAMVVDSS ALLEQVVADV LTSAFDSAGQ RCSALRVLCV QRDCADRLLQ MLRGAMQELH MGNPTQLAVD VGPVIDEEAR ATIARHIERL RASGRPVFQS HAGGQGTAHG TFVPPTLIEL NSITELEREV FGPVLHVVRY ERDELDTLLA QISATGYGLT QGLHTRIDET VAQVLAHSTA GNVYVNRNMV GAVVGVQPFG GEGLSGTGPK AGGPLYLLRL LSRHPANATH GALAATAVQV PDASAQPALL APLSALEHWA QAQGNAALAQ ACAAQAQASC AGLACTLPGP TGERNTYRLL PRERVLCLAD TDEALLLQLS AVLAAGALAL WPQDAQALCA TLPSEVQARI ALVSDWRGDG LGYDAVLHSG SPETRRVECQ RVALRPGPIV GVTAMDGAAD ALQAPLRLLL ERAVSINTTA AGGNASLMTM A
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