Gene Ajs_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2399 
Symbol 
ID4671961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2551244 
End bp2551861 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID639839467 
Producttranslation initiation factor 3 
Protein accessionYP_986636 
Protein GI121594740 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.414773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGTGA GAGCCATCGC TACCGAATTT CGTGACCGTC GCCAGCGCGA GGAGCGCAAG 
CATCGACTGA ACCGTGAAAT CATGGCGCCT GAAGTGCGCC TGTCCGGTCC GGACAACGAG
CCCCTGGGCA TCGTCAGCCT GCAAGAGGCC CTGCGCATGG CGGGCGAGCT GGATGTGGAC
TTGGTTGAAA TTGCAGCCAC CGCTAATCCC CCGGTCTGCC GCCTGATGGA CTACGGCAAG
TTCAAGTATC AGGAGCAGAA GAAGGCGGCC GAGGCCAAGG CCAAGCAGAC GGTCATCGAG
ATCAAGGAAG TCAAGTTCCG CCCTGGTACG GACGATGGCG ACTACAACAT CAAGCTGCGC
AACATCCGCC GTTTTCTGGC GGAGGGCGAT AAGTGCAAGA TCACGCTGCG CTTCCGTGGC
CGCGAGATCA CGCACCAGGA GCTGGGCCTG GCATTGCTCA ACCGCTTGAG GGATGACCTG
GGCGACACCA TTTTGGTGGA GCAGTTTCCC AAGCTGGAAG GCCGCCAGAT GATCATGATG
ATCGCGCCGG CCCGCAAGAA GCCGGCAGGT AAACCTGCCG CCGAAAGCGC TCCCGCCGCT
GGCGACAACG CTGCGTAA
 
Protein sequence
MKVRAIATEF RDRRQREERK HRLNREIMAP EVRLSGPDNE PLGIVSLQEA LRMAGELDVD 
LVEIAATANP PVCRLMDYGK FKYQEQKKAA EAKAKQTVIE IKEVKFRPGT DDGDYNIKLR
NIRRFLAEGD KCKITLRFRG REITHQELGL ALLNRLRDDL GDTILVEQFP KLEGRQMIMM
IAPARKKPAG KPAAESAPAA GDNAA