Gene Ajs_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2385 
Symbol 
ID4672643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2537463 
End bp2537936 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content62% 
IMG OID639839452 
Producthypothetical protein 
Protein accessionYP_986622 
Protein GI121594726 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.300442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAAA TTCAACTGAC TCCCGCCGAG CGCCGGGAAC ACCGCGCCAA TGCCCACCAT 
CTGGACCCCG TGGTCCTGAT CGGTGGCGAC GGACTTACGG CCGCCGTTCA AAAGGAGATC
GATGCCGCAC TCAAGGCCCA TGGCCTCATC AAGGTGCGCG TCTTCAACGA CGACCGCGCC
GCACGCGAGG AGATGTATCA GCAACTGGCC GATGCGCTGA ACGCCGCACC CATCCAGCAT
ATCGGCAAGC TGCTGGTGCT GTGGCGGCCC ATTCCTGCGA AAGAGAAAGC CATCGACGAA
GACCGCATGC CCGGTCCCCG CGATGTGAAG GTACTCAAGT TCAGCAAGCG CGGCGGCCAG
CGCCCCGAGG TCAAACAACT GCGTGTGCTG GGTAACCAGC GTCTGACGCC TGGCGGGCAG
ATCAAGCGTG CCAAGCCCAA GCAGAAGTCG GTGAAAAAAC GCCAGGCCGA TTGA
 
Protein sequence
MPQIQLTPAE RREHRANAHH LDPVVLIGGD GLTAAVQKEI DAALKAHGLI KVRVFNDDRA 
AREEMYQQLA DALNAAPIQH IGKLLVLWRP IPAKEKAIDE DRMPGPRDVK VLKFSKRGGQ
RPEVKQLRVL GNQRLTPGGQ IKRAKPKQKS VKKRQAD