| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2342 |
|---|
| Symbol | |
|---|
| ID | 4673210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2484253 |
|---|
| End bp | 2485053 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639839409 |
|---|
| Product | YaeC family lipoprotein |
|---|
| Protein accession | YP_986579 |
|---|
| Protein GI | 121594683 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.216371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTTCCA AGCGCTCCCT GCTCCAATCG ACCCTGGCCC TGGCAATGGC CGCCGGCCTC
TCGGGCCACG CCCTGGCGCA GGACAAGCCG CTGAAGATCG GCGTGACGGC GGGCCCGCAC
GCGCAGATCT TCGAGCAGGT CAAAAAAGTG GCCGAACAGC AGGGCCTGAA GATCCAGGTG
GTGGAGTTCA GCGACTATGT GCAGCCCAAC GCGGCCTTGG CCGCCGGCGA CCTGGACGCC
AACAGCTACC AGCACAAGCC CTACCTGGAT GCGCAGATCA AGGACCGTGG CTACAAGTTC
GCCGTGGCGG CCAACACCGT CAACTTCCCC ATCGGCCTGT ATTCCAAGAA GGTCAAGAAG
CTGGCTGACC TGAAGGAAGG CGCGCGCTTC GGCATTCCCA ACGACCCCAC CAACGGCGGC
CGCGTACTGC TGCTGCTGCA GGCGCAGGGC CTCATCAAGC TCAAGGACGG CGCAGGCCTG
AAGGCCACGC CGCTGGACGT GGTGGGCAAC CCGAAGAAGC TCAAGTTCGT GGAGCTGGAC
GCCGCGCAGC TGCCGCGCTC GCTGGACGAC CTGGACGCCT CGGCCATCAA CACCAACTTC
GCCATCTCCG CCGGCCTGAA CCCCAAGACC GATTCCATCG CGCAGGAAAG CCCGGACGGC
CCCTACGTCA ACCTGCTCGT GGTGCGTGAG GCCGACAAGA ACAAGCCCTG GGTGGCGCAA
CTGGTCAAGG CCTACCAGAG CGAGGAGATC CGCCGCTTCA TCGAGACGCA GTTCAAGGGC
TCGGTGCTGG CAGGCTGGTG A
|
|---|
| Protein sequence | MISKRSLLQS TLALAMAAGL SGHALAQDKP LKIGVTAGPH AQIFEQVKKV AEQQGLKIQV
VEFSDYVQPN AALAAGDLDA NSYQHKPYLD AQIKDRGYKF AVAANTVNFP IGLYSKKVKK
LADLKEGARF GIPNDPTNGG RVLLLLQAQG LIKLKDGAGL KATPLDVVGN PKKLKFVELD
AAQLPRSLDD LDASAINTNF AISAGLNPKT DSIAQESPDG PYVNLLVVRE ADKNKPWVAQ
LVKAYQSEEI RRFIETQFKG SVLAGW
|
|---|
| |