Gene Ajs_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2318 
Symbol 
ID4673568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2459030 
End bp2460514 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content72% 
IMG OID639839386 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_986556 
Protein GI121594660 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACACCC ACCCTTGCAA GCGGCAGGCG CTGGCGCCCC TGCCGCAACT GCTGACGGGC 
GATGCGGTGC CCGATCTGTT CCAGTGGGTA CATGGCCCCT TGGCGCACTG GGCCCGCACG
CGGCCGCACT CCCTGGCGCT GGCCAATGAA ACCACCCAGT GGGACTTTGC GACGCTGCAC
GACCGTGTGC AGACGCGGGC GCGCTACTGG GATGCGCAAG GCGCGCCGGC CACCGTGCTG
CTGCCCGGTG ATGCCGGCAC GCTGGAGGGG GTGGTGGAAT TCCTGGGCGT GATCGCCAGC
GGGCGCTGCG CGGCGATGGG AGATCCCCAG TGGCCGGCGG GTGTGGCCCG GGCGGTTGCC
GGGCGGCTGC CTTTAGGCTC CGGAGCCCCG GCAGCGGCCA CGCCGCAGTC GCCGTTCTAC
GTGGGCTTCA CCTCGGGTAG CACGGGCCTG CCCAAGGGCT TCATGCGCCA CCACCGCTCC
TGGGTGGAGA GCTTTCGCGT CAGCCTGCAG GACTTTGGTG TCGCGGCGGC CACGCGCGTG
CTGGCGCCGG GCCGCATGTC GCATTCGCTG TTCCTGTTCG GCGCGCTGCT GGGCCTGTGG
ACGGGCGCTG GCGCGGTGCT GCAGGAGCGC TTTTCCGCGC CGCGCGCGCT GGACATCCTG
CGCGCGGGCG GCGCGCCCTT GCTGGTGGCG GTGCCCAGCC AGCTTGTGCT GATGCTGCAG
TGGGCCGAGC GGCGGCAGCT GGCACCTATC GAAGGGGTGG AGCTGGTGCT GATCAGCGGC
GCGCGCTGGC TGCGCGAGCG CACACCCGCG CTGCGCCGGT TGTTCCCGCG TGCACGCATC
GTGGAGTTCT ACGGTGCATC CGAGGCCAGC TACGTCGCCT GGATGGATGC AGAGCCGGGC
GCACCGGCCC AGGCCGTGGG CCGGCCGTTC AGCAACGTGG ACCTGCACAT CGGCCCCGAT
CCCCGCAGCG CCGCGCTGCC GCAGGGCGTG CCGGGGCTGA TCTGGGTGCG CAGTCCCATG
CTGTTCATGG ATTACGTGAA CGCCGCCGAC GGCACCGCCG CCCTGCGCGA GGGCGACTGG
CTCTCGGTGC GCGACATGGG TTACGTGGAC GACAGCGGTT TGCTGCACCT GTGCGGGCGC
GAGAACCGCA TGCTCGTCAC CCAAGGCAAG AACCTGTTCC CTGAGGAAGT GGAGGCGCGC
CTGCTGGCCC ACCCACAGGT GGCGCAGGCC AGCCTGCAGG GTGTGGCCGA CGGTCTGCGC
GGCCTGCGTG TGCAGGCGGT ACTGCAGTGG CAGGGCGACG CGCCGCCACC CGGCGCGCTG
GAGCTGGCGG CCTGGTGCCG CGCGGTGTTG GAGCCTTACA AGGCGCCGCG CCACTGGTGG
GTGTGGGTGG GCGACTGGCC GCAGACGCCC AGCGGCAAGA CCGACCATAC AGCCATCGCC
CGCGCGCTGC AGGCACCGTC GCCCTCGCTG GAGCGCTGGC GGTGA
 
Protein sequence
MNTHPCKRQA LAPLPQLLTG DAVPDLFQWV HGPLAHWART RPHSLALANE TTQWDFATLH 
DRVQTRARYW DAQGAPATVL LPGDAGTLEG VVEFLGVIAS GRCAAMGDPQ WPAGVARAVA
GRLPLGSGAP AAATPQSPFY VGFTSGSTGL PKGFMRHHRS WVESFRVSLQ DFGVAAATRV
LAPGRMSHSL FLFGALLGLW TGAGAVLQER FSAPRALDIL RAGGAPLLVA VPSQLVLMLQ
WAERRQLAPI EGVELVLISG ARWLRERTPA LRRLFPRARI VEFYGASEAS YVAWMDAEPG
APAQAVGRPF SNVDLHIGPD PRSAALPQGV PGLIWVRSPM LFMDYVNAAD GTAALREGDW
LSVRDMGYVD DSGLLHLCGR ENRMLVTQGK NLFPEEVEAR LLAHPQVAQA SLQGVADGLR
GLRVQAVLQW QGDAPPPGAL ELAAWCRAVL EPYKAPRHWW VWVGDWPQTP SGKTDHTAIA
RALQAPSPSL ERWR