| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2309 |
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| Symbol | |
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| ID | 4673074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2446945 |
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| End bp | 2447916 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639839377 |
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| Product | asparaginase |
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| Protein accession | YP_986547 |
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| Protein GI | 121594651 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00324768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.172792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTGG CAGCTGCAAG AAAAATCGTC GTTATGGGCA CCGGCGGCAC GATTGCGGGC
TCTTCCGCGG TGCAAGGTGC CAACGTGGGC TACACGGCCG GGCAGATCGG CGTGGAGCAA
TTGCTGGCCG CGGTGCCCGG GCTGGTGCAG GCCGCGGGCG GCGCGCTGGT GGCTGAACAG
GTGGTGCAGC TGGACAGCAA GGACATGGGC TTTGACGCGT GGGCGCGCCT GGCCGGTCGT
TGCGCCGCAC ACCTGGCCGA CCCGGCCGTG GCCGGCGTCG TCATCACCCA CGGCACGGAT
ACGCTGGAGG AAACCGCCTG GCTGCTGCAC AACCTGCTCG ATACCACCGC CAAGCCGGCG
GTACTGACCT GTGCCATGCG TCCGGCCACG GCGCTCGCGC CGGACGGGCC GCAGAACCTG
CTGGATGCCG TCACGCTGGC GGCCGATCCC TCAGCGCGGG GGGTTCTGAT GGCGGCCGCT
GGCGTGGTGC ATGGGGCACG CGAGGTGAGC AAGGTGCACC CGCTGCGGCT GGACGCGTTC
GACTCCGGCG ATGCCGGGCC TCTGGGCTGG ATGGAAGCGG GGCGCGTGCG CTGGGCCCGC
GGCCTTGCGC CGCAGGTGGA ACAGCCCGCG CATGGCGCGC TGGTGCCGAT CCTGCCAGAT
GCCGCCTGGC CACGCGTGGA AATTGTTCTC AGCCACGCCG GCGCGGATGG CGCGTTGGTG
GACTGGCTGG TGGAGAAGGG CGTGCACGGC CTCGTGGTGG CCGCCACCGG CAATGGCACG
CTGCACCATG CGCTGGAGGC CGCGCTCGCG CGTGCCGTGG AGGCCGGGGT GCAGGTGCGC
GTGGCTTCGC GCTGCCCGCA GGGGCGGATG ATGGACCTGA CGGGCACGCC CTGGCGCGAT
GCGGATGGGC TGAGCCCCGT GAAGGCGCGG GTCAGCCTGG TGCTGGAGTT GATGCAGTCC
GCTAATTCAT AA
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| Protein sequence | MQVAAARKIV VMGTGGTIAG SSAVQGANVG YTAGQIGVEQ LLAAVPGLVQ AAGGALVAEQ
VVQLDSKDMG FDAWARLAGR CAAHLADPAV AGVVITHGTD TLEETAWLLH NLLDTTAKPA
VLTCAMRPAT ALAPDGPQNL LDAVTLAADP SARGVLMAAA GVVHGAREVS KVHPLRLDAF
DSGDAGPLGW MEAGRVRWAR GLAPQVEQPA HGALVPILPD AAWPRVEIVL SHAGADGALV
DWLVEKGVHG LVVAATGNGT LHHALEAALA RAVEAGVQVR VASRCPQGRM MDLTGTPWRD
ADGLSPVKAR VSLVLELMQS ANS
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