Gene Ajs_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2304 
Symbol 
ID4672860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2443651 
End bp2444076 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID639839372 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_986542 
Protein GI121594646 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0677093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.134165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTC GCCCCCGCCA AAAGGAAGAG CCGGAGATCA ACCTGATCCC CTTCATCGAC 
GTGCTGTTGG TGATCCTCAT CTTCCTGATG CTGACCACCA CCTACAGCAA GTTCACCGAG
CTGCAGCTCA CCCTGCCCGT AGCGGACGCT CAGCAGTTGC GCGACCACCC CAAGGAAGTC
ATCGTGGCCG TGGCCGCCGA CGGACGCTAC GCCATCAACA AGACCACGCT GGAGGGCCGG
CAGGTCGACC AGGTGGCGCG TGCGCTGGCC GATGCCGCCA CTGCGGGGCC GAACAGCGTG
GTCATCATCA GCGCCGACGC ATCAGCCCCC CACCAGTCCG TGGTCACGGT GATGGAGGCC
GCGCGCCGCG TGGGCCTGTC GCAGATCACC TTTGCCACCC AGTCGTCGGC CACGGCCGGC
AAGTAA
 
Protein sequence
MNFRPRQKEE PEINLIPFID VLLVILIFLM LTTTYSKFTE LQLTLPVADA QQLRDHPKEV 
IVAVAADGRY AINKTTLEGR QVDQVARALA DAATAGPNSV VIISADASAP HQSVVTVMEA
ARRVGLSQIT FATQSSATAG K