| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2300 |
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| Symbol | |
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| ID | 4672785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2437959 |
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| End bp | 2440193 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639839368 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_986538 |
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| Protein GI | 121594642 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.288016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00925586 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACCC AGAAACCCAC CATCATCTAT ACCCTGACCG ACGAGGCTCC CCGCCTGGCC
ACGGCCTCCT TTCTGCCCAT CGTGCGCAGC TTCGCGTCGG TGGCCGGTAT CGAAGTGGCC
GAGAGCGACA TCTCCGTGGC GGCGCGCGTC CTGGGTGAGT TCCCCGACTT CCTGACGCCC
GAGCAGCGCG TACCCAATAC GCTGGCTGAA CTGGGCAAGA AGACGCTCGA GCCCGACGTC
AACATCATCA AGCTGCCCAA CATCAGTGCG TCGGTGAGCC AGCTCATGGC AGCCATCAAG
GAACTGCAGT CCAAGGGCTA CAAGATCCCC GACTACCCCG AGAACCCCGC CAACGAGCAG
GACAAGGAAA TCAAGGCGCG CTACGGCAAG TGCCTGGGCT CGTCGGTCAA CCCGGTGCTG
CGCGAAGGCA ACTCCGACCG CCGCGCGCCG GCAGCCGTGA AGAACTTCGC CAAGAAGCAC
CCGCATTCCA TGGGCGAGTG GAAGCAGTGG TCGCAAACCC ATGTGTCGCA CATGCACGAG
GGCGACTTCT ATCACGGCGA AAAATCCATG ACCCTGGACA AGGCCCGCGA CGTGAAGATG
GTGCTGCAGA CCCAATCGGG CAAGACCGTG GTGCTGAAAG AGAAGGTGGC CCTCAAGGAC
GGCGAGATCA TCGACTCGAT GTTCATGAGC AAGAAGGCCC TGTGCGCCTT CTACGAGAAG
GAACTGGCCG ACTGCAAGGA AGCCGGCATC CTGTTCTCGC TGCACGTGAA GGCCACGATG
ATGAAGGTCT CGCACCCGAT CGTGTTCGGT CACTGCGTGA AGATCTACTA CAAGGAAGCC
TTCGAGAAGC ACGGCGCGCT GTTTGACGAG CTGGGCATCA ACGTCAACAA CGGCATGGCC
ACGTTGTACG AGAAGATCGA GACGCTGCCG GCCTCCAAGC GTGAAGAGAT CATCCGCGAC
CTGCACGCCT GCCAGGAGCA CCGTCCGGCG CTGGCCATGG TGGACTCCGC CAAGGGCATC
ACCAACTTCC ACTCGCCCAA CGACATCATC GTGGACGCCT CCATGCCCGC CATGATCCGC
CAGGGCGGCA AGATGTGGGG CGCCGACGGC AAGCCTTACG ACTGCAAGGC CGTGATGCCC
GAGTCGACCT TCGCCCGTAT CTACCAGGAG ATGATCAACT TCTGCAAGTG GCACGGCAAC
TTCGACCCGC GCACCATGGG CACCGTGCCC AACGTGGGCC TGATGGCGCA GAAGGCCGAG
GAATACGGCT CGCACGACAA GACCTTCGAG ATCGCCGAAG ACGGCGTGGC CAACATCGTG
GACATCGCCA CGGGTGAAGT GCTGCTGTCG CAGAACGTGG AAACCGGCGA CATCTGGCGT
ATGTGCCAGG TCAAGGACGC TGCGATCCGC GACTGGGTGA AGCTGGCCGT GACCCGCGCG
CGCAACTCCG GCATGCCCGC CGTGTTCTGG CTGGACCCCT ATCGCCCGCA CGAGAACGAG
CTGATCAAGA AGGTCGAGAA GTACCTGAAG GACCACGACA CTACCGGCCT CAACATCCAG
ATCATGAGCC AGGTGCGAGC GATGCGCTTC ACGCTGGAGC GCGTGGCGCG TGGCCTGGAC
ACCATCTCGG TGACCGGCAA CATCCTGCGC GACTACCTGA CCGACCTGTT CCCGATCATG
GAACTGGGCA CTTCCGCCAA GATGCTGTCC ATCGTGCCCC TGATGGCCGG CGGCGGCATG
TACGAGACGG GCGCGGGCGG CTCCGCTCCC AAGCACGTGC AGCAGCTGCT CGAAGAGAAC
TACCTGCGCT GGGACTCGCT GGGGGAATTC CTGGCGCTGG CCGTGTCGCT GGAAGACCTG
GGCCTGAAGG AAAACAACCC CCGCGCCAAG CTGCTGGCCA AGACGCTGGA CCAGGCTACC
GGCAAGCTGC TGGACGAGAA CAAGTCGCCC TCGCGCAAGG TGGGCGAGAT CGACAACCGC
GGCAGCCAGT TCTATCTGTC GCTGTACTGG GCCCAGGCCC TGGCCGCGCA GTCCGAGGAC
GCCGCGCTGG CCGCCAAGTT CGCTCCGTTG GCCAAGACCC TGGCCGATAA CGAGGCCAAG
ATCGTCGAGG AACTGCGCGT GGTGCAGGGC AAGCCCGCCG ACATCGGTGG CTACTACCTG
CCCGATCTGT CCAAGCTGGA CGCCGTGATG CGCCCCAGCG CCACGTTCAA CGCGGCCATC
GCAGCGCTCG CCTGA
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| Protein sequence | MSTQKPTIIY TLTDEAPRLA TASFLPIVRS FASVAGIEVA ESDISVAARV LGEFPDFLTP
EQRVPNTLAE LGKKTLEPDV NIIKLPNISA SVSQLMAAIK ELQSKGYKIP DYPENPANEQ
DKEIKARYGK CLGSSVNPVL REGNSDRRAP AAVKNFAKKH PHSMGEWKQW SQTHVSHMHE
GDFYHGEKSM TLDKARDVKM VLQTQSGKTV VLKEKVALKD GEIIDSMFMS KKALCAFYEK
ELADCKEAGI LFSLHVKATM MKVSHPIVFG HCVKIYYKEA FEKHGALFDE LGINVNNGMA
TLYEKIETLP ASKREEIIRD LHACQEHRPA LAMVDSAKGI TNFHSPNDII VDASMPAMIR
QGGKMWGADG KPYDCKAVMP ESTFARIYQE MINFCKWHGN FDPRTMGTVP NVGLMAQKAE
EYGSHDKTFE IAEDGVANIV DIATGEVLLS QNVETGDIWR MCQVKDAAIR DWVKLAVTRA
RNSGMPAVFW LDPYRPHENE LIKKVEKYLK DHDTTGLNIQ IMSQVRAMRF TLERVARGLD
TISVTGNILR DYLTDLFPIM ELGTSAKMLS IVPLMAGGGM YETGAGGSAP KHVQQLLEEN
YLRWDSLGEF LALAVSLEDL GLKENNPRAK LLAKTLDQAT GKLLDENKSP SRKVGEIDNR
GSQFYLSLYW AQALAAQSED AALAAKFAPL AKTLADNEAK IVEELRVVQG KPADIGGYYL
PDLSKLDAVM RPSATFNAAI AALA
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