| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2253 |
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| Symbol | |
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| ID | 4670650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2388140 |
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| End bp | 2389453 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639839320 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_986492 |
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| Protein GI | 121594596 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00653025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.641538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCG CCATCCGCTA CCTGCGCCTG TACCTGCACC GCCCTGCAGC GCAGGGGGGC
GGGCGGCGCG GCATCGGCTA CCTGTCCCAG TACGGCGACA TCCTGCGCGT GTCCTTCGAT
GAGGACTACA TCGCCGACCC GCAGCGCCCC ACCCTGTCGC TGAGCTACCG CGGCGCGAAC
GAGGCGGACA CGCAGCGGAT CCTGCGCTCG GCGCGTGACG CCCGCTTGGT GCGCACCGAC
GGGCGTTGGC CGGCGTACTT CCAGAACCTG CTGCCCGAGG GCCACAACCG CGACCGCCTG
GCGCGCGAAC GCGGCTGCGC GCCCGACGAC GAATTCGAGC TGCTGGCCGC CGCCGGCCAC
GACCTGATGG GCGCGCTGGA GGTCGAACCC GTGCCCGCCC AAGAGGGCGT GCCCGACGTG
GTGCGCTACT GGCACACCAC GCAGGGCCTG GACGTGCTGG AGCCCGGGTT TGTCGAATAC
CCGGTGGAAG ACGCCGCCTC GCTGCCCGGT GTGGTCACCA AGTTCAGCGC CGTGCAGGAC
GGGCGCCGCT ACCTCGTCAA GCGCCGCGGC GCCGCCGGCA GCGTGATCCT CAAGCTGCCC
ACCACCGCCC ACCCGGACCT GGTGGCCAAC GAGTTCACCT GCTACCAGCT GGCCGGTAGC
CTGGGCCTGC ATTGCGCCCA GGCGCGCATC ATCACCCGCG CCGAGGCCGA GCTGCCCGAG
GCCGTGCCGT TAGACGACAT CCTGGCCGTG CAACGCTTCG ACCATCTGGC CGACGGCACC
CGCGTGCACA TGGAGGAGTT CAACCAGGCC CTGGGCTACG CGCCGCGCCA GAAGTACGGC
AAGGGCCTGT TGCAGGACTG GGCCACCATG CTGCGCGTGG TCGATCGCCT GAGCGACCAG
CCGGTGCAAG ACACCCGCGA GTTCCTGGCG CGCATGGTGG CGTTCATCCT CATGGGCAAC
ACCGACGCTC ACCTGAAGAA CTGGGCACTG GTCTACCCCG ACGGGCACAC GCCGCGCCTG
GCGCCGCTGT ACGACCCGGT GTGCGTGGCT GCGTTCTTCG AGGGAGCGAC CGAGCACCAG
TACGCGGTGA ATCGCGCCAT CGACCGCAGC ATGCGCGCGC TGGACTGGGA CGCACTGCAG
GCCCTCATCA AGACCGCCGG CCTGTTGCGC ATACCGCGCC ACCTGGCACT GCTGCGGGAC
CTGGTACGCC GCGCGCAGGC CGACTGGCCC GCACTGCTGG CTGACGCCCC CTCCACGCTG
CAGCGCACCG TGCAGGCGCG GCTGGCGGGT GGCGTCGCAC TCACGCACCC ATAA
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| Protein sequence | MSTAIRYLRL YLHRPAAQGG GRRGIGYLSQ YGDILRVSFD EDYIADPQRP TLSLSYRGAN
EADTQRILRS ARDARLVRTD GRWPAYFQNL LPEGHNRDRL ARERGCAPDD EFELLAAAGH
DLMGALEVEP VPAQEGVPDV VRYWHTTQGL DVLEPGFVEY PVEDAASLPG VVTKFSAVQD
GRRYLVKRRG AAGSVILKLP TTAHPDLVAN EFTCYQLAGS LGLHCAQARI ITRAEAELPE
AVPLDDILAV QRFDHLADGT RVHMEEFNQA LGYAPRQKYG KGLLQDWATM LRVVDRLSDQ
PVQDTREFLA RMVAFILMGN TDAHLKNWAL VYPDGHTPRL APLYDPVCVA AFFEGATEHQ
YAVNRAIDRS MRALDWDALQ ALIKTAGLLR IPRHLALLRD LVRRAQADWP ALLADAPSTL
QRTVQARLAG GVALTHP
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