Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2202 |
Symbol | |
ID | 4674509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2331946 |
End bp | 2333901 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639839271 |
Product | DNA mismatch repair ATPase-like protein |
Protein accession | YP_986443 |
Protein GI | 121594547 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000849326 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.525867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA AATACAGAAT GACGGTCGAC CTGAACGTGC TCGACCACCT CGGGATCAAC CTCTACAGCA ACATCGCCGC CGTTCTGACC GAGGCCGTCG CGAACGCCTG GGATGCCGAC GCCGAGACCG TCGACATCAA GATCGATTCG GACGGCAACC GGATCGAGAT CCTCGATGAC GGTATCGGTA TGTCGGTCGA TGACATGAAC GGCAAGTACC TGCGGGTCGG TTATCGACGG CGAGATGAAG ATCTCGAGCA TGGCAAGACG ACTGCCAAGG GCCGACCGGT GATGGGCCGC AAAGGGCTGG GAAAACTCTC GCTGTTCTCG ATTGCTAACG TCATCGAAGT CGAGTCAGCC AGAGATGGCT CAGCTCATGG CCTTCGCATG ACCGTGGACG GAATCCACGA ATCGGTTCAG AAGAGGGAGC CCTTCTACAG CCCCGAGTCC CTGCCCGCCG ATCAGATCGC GGTAACCAAG GGAACACGAA TCGTTCTGCG CGATATCAAG CGCCAGCGGC TCGGTCGTGG TGCGCTGGCT CTTCGCAAGC GCCTGGCGCG CCGCTTCTCT GTGATCGGGG AGGCCCACGG GTTCAAGATC GATCTCGATG GGCAGCCCAT CACACCCTCC GATCGTGGCG ACCTGCCGAT GGTGCAGTTC CTCTGGCAGT TCGGTGACGA CGCACTCGAC CTGAGTCCCG CCGGTCAGCT CCTGGAGAAG GAATCGCTTC CGAACCGCTT CGATGCTTGG GACATGGGCT GGCGGGTCAG CGGCTGGATC GGTACCGCCA GATTCCCCAA GCAACTCGAT AGTGAGGATG CCGGCAATCT GAATGGCATC GTCGTGTTCG CCCGTGGCCG CCTGTTTCAC GAGAACATCC TCGACAAACT GAACGACGGG CGGCTCTACA CGAAGTACCT CACCGGGCAG ATCGAGGCCG ATTTCCTAGA CGCCGACGAC GCACCAGACA TCGCGACCAG CGATCGGCAG CGCGTGCAGG AGGATGACCC CCGATATGGG CAGCTGATCG CTTTCCTGAA ATCACGTCTT ACGCAAGTCG AGAAGCGCTG GACGGAATGG CGCAAGAAGC ACGAGGTCGA GAAAGCGAAG GAAACATCGC CCGCCCTCGC CGAGTGGCTC GATACGCTCC CCGAGGGATA CAAAAAGAGC GCGGAGACGC TGATCGCCAA ACTCAGTGCG CTGCCGGTCG ATGAGGAAGA GGATCGGAAG CTCATGTACC GGCACGGCAT CCTGGCATTC GAGCGCATGA AGCTGCGCGG CTCGACCGAG GAGTTTGTGA CGAGCATCGA GAGTGCCGAC AGGCTGCTGG CCGTGCTCGC CGACAGAGAC TCGCTTGAGG CATCCCTCTA CCGGGACATC GTCAAATCGC GTCTGGATGC CATCCGGGAT TTCCAGACCA TCATCGATGA GGACGCAAAG GAACGGGTGC TCCAGAAGTA CCTGTTCGAT CACCTCTGGT TATTGGACCC GGCATGGGAG CGCGCCACGG GGAGCCCGAT CATGGAATCG CGCCTGACGA CGGAAGGCGT GCTGATCGAA GACATGACCG AGAAGGAACG TCTCGGCCGC GTGGACATCG CCTACCGCAC CAATGCGGGC AAGCACGTCA TCGTCGAGCT GAAGAAGGTC GGCCGCAAGA TGGGATTGCT CGAACTGGTG GAGCAAGGTC AGACCTACGT CGACAAGCTC ACTAAGATTC TGCGGGAGCA GAACCAGACC AGCCCCGACA TCGAGGTGAT CTTCGTTCTG GGCAAGACCG TCGACGAAGA GGCATCGAAC CCCGACCGCC TCAAGTCATC GATGACATCG ATCTCACCGG GCAGCCGCAT CGTCCATTAC GACACCTTGA TTCGGGGCGC TCAAGAGGCG TATTCGGCAT ACATCGAGAA GAGCAAGTCA CTCGACAAGC TCGAAAAGAT CGTGGACAGG ATTTGA
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Protein sequence | MSDKYRMTVD LNVLDHLGIN LYSNIAAVLT EAVANAWDAD AETVDIKIDS DGNRIEILDD GIGMSVDDMN GKYLRVGYRR RDEDLEHGKT TAKGRPVMGR KGLGKLSLFS IANVIEVESA RDGSAHGLRM TVDGIHESVQ KREPFYSPES LPADQIAVTK GTRIVLRDIK RQRLGRGALA LRKRLARRFS VIGEAHGFKI DLDGQPITPS DRGDLPMVQF LWQFGDDALD LSPAGQLLEK ESLPNRFDAW DMGWRVSGWI GTARFPKQLD SEDAGNLNGI VVFARGRLFH ENILDKLNDG RLYTKYLTGQ IEADFLDADD APDIATSDRQ RVQEDDPRYG QLIAFLKSRL TQVEKRWTEW RKKHEVEKAK ETSPALAEWL DTLPEGYKKS AETLIAKLSA LPVDEEEDRK LMYRHGILAF ERMKLRGSTE EFVTSIESAD RLLAVLADRD SLEASLYRDI VKSRLDAIRD FQTIIDEDAK ERVLQKYLFD HLWLLDPAWE RATGSPIMES RLTTEGVLIE DMTEKERLGR VDIAYRTNAG KHVIVELKKV GRKMGLLELV EQGQTYVDKL TKILREQNQT SPDIEVIFVL GKTVDEEASN PDRLKSSMTS ISPGSRIVHY DTLIRGAQEA YSAYIEKSKS LDKLEKIVDR I
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