Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2171 |
Symbol | |
ID | 4673350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2298290 |
End bp | 2299960 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639839240 |
Product | integrase catalytic subunit |
Protein accession | YP_986412 |
Protein GI | 121594516 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAG CCATCGACCT CACGCAGGTC AGCGAAGCCG ATTGGGCCAA GGCACGCGAC CGACTCGCCG TGATCCGCCG TCTGGCCAAG GCCACCGAGC GCACGCGCGA GGACGTGGCC CAGGCAGCCA GCCAGATCGG ATGCAGCGTC AGCTCGACCT ACGACCTGCT GGCACGCTAT CTCGCCGCTC CGCAGTTGAC CAGCCTGCTG CCGCAGCAGC GTGGCCGCAA GCAAGGCAAG TCGATGCTGG TGCCGGAGGT GGCCGCGATC ATTAATCAGG TCACGGAGGA CATGTACCTG ACGCGGCAGA AGCCGCGGGT GTCTGATCTG GTCGCGCAAG TCCATATACG ATGCCGAGCG GCGGGCCTGG CGCTGCCCAG CCGGGGAGCG ATCGAGCGCC GGCTGAGTGC CCGTCCGGCT TCGGAGGTGA CGGCCCAGCG TCACGGCCGC AAGGCGGCGC GTGATCGGTT TGCGCCGACA ACCGGGTCGC TGGAAGCGCC CTGGCCGCTG TCGCTGGTGC AGATCGACCA CACGCTGGTC GATGTGATCG TGGTGGACAG CCAGACGCGC GAGCCGATCC AGCGGCCCTG GCTGACGCTC GCCATCGACG TCTGCACGCG CTGCGTGGCC GGCTTGCACC TGTCGCTGGA GCCTCCATCG GCGACGTCGG TGGCGCTGTG CATCAGCCAG GCCGCATTGC CCAAGGATGC CTGGCTGGCC GAGCGCGGGA TCGACGGGGC CTGGCCTGTG CATGGCATCC CCGAACGCCT GCATCTGGAC AACGCCAAGG AGTTCCGCTC CGAGGCGCTG CGGCGCGGTT GCGAGCAGCA TGGCATCGCC ATCGACCATC GGCCGGTGCG CACGCCACAT TACGGCGGCC ACATCGAGCG CCTGATCGGC ACGATGATGG GCAAGGTCCA CCTGCTGCCG GGAACGACCT TCTCCAACGT GCAGGCCAAG GGCGACCTCG ATCCTTCCAA AAGCGCCGTG ATGACCCTGG AAGAAGTCGA GCGGTGGCTG GGGCACGCCA TTGCCGGCGT GTATCACCGC GAAGTACATC GGGGGCTGGG CATGCCGCCG CTGGTAGCCT GGGAGAAAGG CATCTCGGGC GACGATCAGG TTCTCGGCCG TGGCAGTCCG ACGACGGTGA GCGATCCACG GCGCTTCCTG ATCGACTTCC TGCCAATCGC CCGGCGCCTC GTGCGGCGCG ATGGCGTGTC GCTGCACTCC ATCGGCTACT GGTCGGACGT GCTGTCCACC TGGATCGGGC ATGCCGAACC GATGATCGTC CGCTTCGATC CGCGCGACCT GAGCCGCATC TATCTGCTGG GGCCGGACGG AACCTACTAC GACCTGACCT ACCGTGACTT GCGACGCCCG CCGATCAGCC TGTGGGAACA CCGGGCTGCG CTCAAGCGAC TGCGCGAGCA AGGCCATGCG CATGTCGATG AAGCCGCGAT CTTCCGCGCG GTGCAAGCCA TGCGCGAGAT CGCTGACCAG GCAGCGCACA CCAGTAAAAC CGCACGCCGG CAAAAGGAGC GTCGGCGTAT GGTCCAACAA AAGCAGGCAG TCGTCGCACC GGCAGCTTCC GCTCCTGTGG AAACCAACGA CCTTCCTGCG AACGGGCAAC AGCCGCATGA GCAGATGCTC CCGTTCGAGG AGTGGAATTG A
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Protein sequence | MTAAIDLTQV SEADWAKARD RLAVIRRLAK ATERTREDVA QAASQIGCSV SSTYDLLARY LAAPQLTSLL PQQRGRKQGK SMLVPEVAAI INQVTEDMYL TRQKPRVSDL VAQVHIRCRA AGLALPSRGA IERRLSARPA SEVTAQRHGR KAARDRFAPT TGSLEAPWPL SLVQIDHTLV DVIVVDSQTR EPIQRPWLTL AIDVCTRCVA GLHLSLEPPS ATSVALCISQ AALPKDAWLA ERGIDGAWPV HGIPERLHLD NAKEFRSEAL RRGCEQHGIA IDHRPVRTPH YGGHIERLIG TMMGKVHLLP GTTFSNVQAK GDLDPSKSAV MTLEEVERWL GHAIAGVYHR EVHRGLGMPP LVAWEKGISG DDQVLGRGSP TTVSDPRRFL IDFLPIARRL VRRDGVSLHS IGYWSDVLST WIGHAEPMIV RFDPRDLSRI YLLGPDGTYY DLTYRDLRRP PISLWEHRAA LKRLREQGHA HVDEAAIFRA VQAMREIADQ AAHTSKTARR QKERRRMVQQ KQAVVAPAAS APVETNDLPA NGQQPHEQML PFEEWN
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