Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2156 |
Symbol | |
ID | 4672306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2281797 |
End bp | 2283050 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639839227 |
Product | transposase, mutator type |
Protein accession | YP_986399 |
Protein GI | 121594503 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0191719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0398782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAAGT CTAACCTGCA TGCTCTTTCA CAGCCAGAGA TGACTAGCAA TGACCCGCTG CACGAGCTGA TTCGGCAAGG TGCGCGTGAC CTGATTGCCC GGGCAGTTGA GACAGAGCTC GAAGGTCTCT TGAGCCAGTA CGCTGACATC AAGACGGCCG ATGGCCGGCA GGCGGTGGTA CGCAATGGGT ATCTTCCCAA ACGCACCATC CAGACCGGTG TTGGCGATGT GGAGGTTCAG GTGCCCAAGG TCCGGGATCG CAGTGGTGCC GGCATACGCT TCAATAGCCA CCTGCTACCG CCTTATCTGA AACGAGCGAG GAGTATGGAT GAGCTGATCC CATGGCTGTA CCTACGGGGT ATCTCGTCGG GCGACTTCCA GGAGGCCCTC AGCGCTCTGG TCGGCGAACA GGCCAAGGGC CTATCGGCCA ACACGGTGTC CCGGCTCAAG GCGCAATGGC TTGATGAGCA CAAGGATTGG CAGCGGCGGG ATCTGAGCCA GACGCGTTAC GTCTATTGGT GGGCAGACGG CGTGTACAGC AATGTCCGCT TGGATGACCG GCTTTGCCTG CTGGTAATTA TCGGCGTCAC TGAGCATGGC CATAAGGAGC TGGTAGCTGT TGAGGACGGC CACCGGGAGT CCGAAGCCAG TTGGCGAGAG CTGCTGACTG GGCTGAAGGA ACGAGGCCTG GAGCCTTCCC CCAAACTTGC CGTAGGCGAC GGCGCCCTTG GCTTCTGGAA TGCCCTGAGC AAGGTGTTTC CTGATACCCG TCATCAACGG TGCTGGGTTC ACAAGACCGC CAATGTGCTG GACAAGCTGC CCAAGTCGGT GCAGCCAAAG GTGAAGTCAG CACTACACGA GATCTACCTG GCGGAGACCC GTGACAGCGC TCACAAGGCG TTTAACAGCA CCTTGAGCCG GTTCCGGGAC AAGTACCCGA AGGCCATGGA GAACCTGGAG AAGGATCGCG ACGAACTGCT GGCCTTCTAT GATTTTCCGG CGATTCACTG GATTCACTTG CGGACCACCA ACCCGATCGA ATCCACCTTC GCCACCGTAC GACTGAGGAC CAAGCGGAGC CGGTCTTGCG GCTCCCGCGA CACCACGTTA TCGATGGTAT TCAAACTGCT CCAATCCGCT CAGAAACGCT GGAAGCGAAT AAAGGGATTC GATCAACTGA AGCTGGTCGT GGACAATGTT CAGTTTCAAG ATGGAATACA GGTGGATAAT CAATCGGACA GGAACGCTGC CTGA
|
Protein sequence | MSKSNLHALS QPEMTSNDPL HELIRQGARD LIARAVETEL EGLLSQYADI KTADGRQAVV RNGYLPKRTI QTGVGDVEVQ VPKVRDRSGA GIRFNSHLLP PYLKRARSMD ELIPWLYLRG ISSGDFQEAL SALVGEQAKG LSANTVSRLK AQWLDEHKDW QRRDLSQTRY VYWWADGVYS NVRLDDRLCL LVIIGVTEHG HKELVAVEDG HRESEASWRE LLTGLKERGL EPSPKLAVGD GALGFWNALS KVFPDTRHQR CWVHKTANVL DKLPKSVQPK VKSALHEIYL AETRDSAHKA FNSTLSRFRD KYPKAMENLE KDRDELLAFY DFPAIHWIHL RTTNPIESTF ATVRLRTKRS RSCGSRDTTL SMVFKLLQSA QKRWKRIKGF DQLKLVVDNV QFQDGIQVDN QSDRNAA
|
| |