| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2083 |
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| Symbol | |
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| ID | 4671145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2198316 |
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| End bp | 2200511 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639839161 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_986335 |
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| Protein GI | 121594439 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0521924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC AATCCGACCT TTTTCCGGCT CCCGCGCCCA AGGGGTCTGC GCTGGTAGCT
ACAAAAATCA AAGCGCTGCG CGAGCAGCTG AACCGCTGGG CGCACGAGTA CTACGTCCAG
GACACGCCGA GCGTGCCCGA TGCCGAGTAT GACCGCGCGT TCCAGCAGTT GCAGGCGCTG
GAGGGCGCTT ACCCCGACCT GGTGACGCCC GACTCGCCCA CGCAGCGCGT GCTGGGCGCG
GTGCTGGACG GGCTGACACC GGTGCGCCAC CGCGTGCCCA TGCTCAGCAT CCGCACTGAA
ACCGACACAG AGGCCAGCGG CGCCCAAGCC TTCGACGCGC GCGTGCGCCG TGAACTGAAG
CTGCCGCCCG ATGCGCCGCC GGTGGAATAC GTGGCCGAAC CCAAGTTCGA CGGCCTGGCG
ATGAGCCTGC GCTACGAGGG CGGGCGCCTG GTGCAGGCCG CCACGCGCGG TGACGGCGAG
GTGGGTGAGG ATGTGACGCA CAACGTGCGC ACCATCCGCC AGATCCCCCT GAGCCTGCCC
GCCGGTGTGC CGCCGGTGCT GGAGGTGCGC GGGGAGGTCT ACATGCGCCG CGCGGACTTC
GACGCACTCA ACGAGCGCCA GCGCGAGAAG GGCGACAAGA CCTTCGTCAA CCCGCGCAAC
GCCGCCGCCG GCGCGGTGCG CCAGTTGGAC TCAGGCATCA CCGCGCAGCG GCCGCTGTCC
TTCTTCGCCT ACGGCCTGGG CGAGGTCACG CCGGCCGCCG AGGGCGGGCC CGACTTCGGC
ACGCACTTCG GCATGCTGCA GCAGCTCAAG GAATGGGGCT TTCCGGTCGC AGCCCAGGTG
CAGATTGCGC AAGGCGCTTC TGAACTCATA GCGTTCCATC AGCGTGTGGG GGCCGAACGG
GACGCGCTGC CCTACGACAT CGACGGCGTG GTCTACAAGG TCAACAGCCT GGCACTGCAG
CGCCAGCTGG GCTTTGTGAC GCGCGAGCCG CGCTGGGCCG TGGCCCACAA GTATCCGGCC
CAGGAGATGG TCACGCGCGT GGAAGGCATC GACGTGCAGG TGGGCCGCAC GGGCAAGCTG
ACGCCCGTGG CGCGACTCGC GCCGGTGTTC GTGGGCGGCG TCACGGTGAC CAATGCCACG
CTGCACAACC TGTTCGAGCT GCGCCGCAAG AAAGTGCGCG TGGGCGACCA GGTGATCGTG
CGCCGCGCGG GCGACGTGAT TCCCGAGGTG GTGGGCGTGG TGCCGGCGGG CGCAGGCCTG
GCAGTGCTGG CGGGCTCCGA CGCGCTGGTG GACGCCGCCA GCAGCGCGGA CGGCACCGCA
CCCGCGCAGC CGCTGGCGGG GCCGCGCCAG CCCTACGTGC CCAACTTCCG CATGCCGCGC
CAGTGCCCCA TCTGCGGCAG CGCCGTGGTG CGCGAGCCGG GCGAGGTCAA CCACCGCTGC
TCCGGCGGGC TGTTCTGCCC CGCGCAGCGC AAACAGGCGG TGCTGCACTT CGCCCAGCGC
CGCGCCATGG ACATCGAGGG CCTGGGCGAG AAGCTGGTGG ACCAGCTCGT GGACGGCCAC
GTGATCCGCA CGCTGCCCGA CCTGTACCGG CTCGGGCTGT CCAGCCTTGC GCAGCTCGAC
CGCATGGCCG AGAAGTCCGC GCAGAACGTG CTGGATGCGC TCGACAAATC CAAGCGCACC
ACGCTGGCGC GCTTTCTCTT CGGCCTGGGC ATCCGCCATG TGGGCGAGGC CACGGCCAAG
GACCTGGCGC GCCACTTCGG CCAGTTGGAC GCCATCATGG ATGCGGGCGT GGAGCAGTTG
CTGCAGGTGA ACGACGTGGG GCCCGTGGTG GCCGAGGCCA TCCACACCTT CTTCGCGCAA
CCCCACAACC GCGAGGTGGT CGAGCAACTG CGGGCCTGCG GCGTCACCTG GGACGAGAGC
GAGCCCGCTG CCGCCGCCAC GCTGCCCCTG GCGGGCATGA CCGTGGTGCT GACCGGCACG
CTGCCCACCC TGGGCCGCGA CGCGGCCAAG GACCTGCTGG AGTCCGCCGG TGCCAAGGTG
GCAGGTTCGG TCAGCAAGAA GACGCACTAC GTGGTGGCCG GCGCCGACGC GGGCAGCAAG
CTCGCCAAGG CGCAGGAGCT GGGCATCCCC GTGCTGGACG AGGACGGGTT GCATGCGTTG
CTGCGGGGCA CACCGCCCAA CGCAGGTGGG GCCTAG
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| Protein sequence | MTEQSDLFPA PAPKGSALVA TKIKALREQL NRWAHEYYVQ DTPSVPDAEY DRAFQQLQAL
EGAYPDLVTP DSPTQRVLGA VLDGLTPVRH RVPMLSIRTE TDTEASGAQA FDARVRRELK
LPPDAPPVEY VAEPKFDGLA MSLRYEGGRL VQAATRGDGE VGEDVTHNVR TIRQIPLSLP
AGVPPVLEVR GEVYMRRADF DALNERQREK GDKTFVNPRN AAAGAVRQLD SGITAQRPLS
FFAYGLGEVT PAAEGGPDFG THFGMLQQLK EWGFPVAAQV QIAQGASELI AFHQRVGAER
DALPYDIDGV VYKVNSLALQ RQLGFVTREP RWAVAHKYPA QEMVTRVEGI DVQVGRTGKL
TPVARLAPVF VGGVTVTNAT LHNLFELRRK KVRVGDQVIV RRAGDVIPEV VGVVPAGAGL
AVLAGSDALV DAASSADGTA PAQPLAGPRQ PYVPNFRMPR QCPICGSAVV REPGEVNHRC
SGGLFCPAQR KQAVLHFAQR RAMDIEGLGE KLVDQLVDGH VIRTLPDLYR LGLSSLAQLD
RMAEKSAQNV LDALDKSKRT TLARFLFGLG IRHVGEATAK DLARHFGQLD AIMDAGVEQL
LQVNDVGPVV AEAIHTFFAQ PHNREVVEQL RACGVTWDES EPAAAATLPL AGMTVVLTGT
LPTLGRDAAK DLLESAGAKV AGSVSKKTHY VVAGADAGSK LAKAQELGIP VLDEDGLHAL
LRGTPPNAGG A
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