Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2068 |
Symbol | |
ID | 4671373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2180252 |
End bp | 2181415 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639839146 |
Product | twitching motility protein |
Protein accession | YP_986320 |
Protein GI | 121594424 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0618461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.330404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA TGGAGCGGAT TCTGCGCCTG ATGGCCGACA AGAAGGCATC CGATGTCTAC CTGTCGGCCA ACGCACCGGC GCTGATCAAG ATCAACGGCG AATGCGTGCC GATCAACAGC CAGATCCTGC CGCCCGACGC GCCCAAGAAC CTGCTGTCCG AGATCGTCCC CCCCGACCGC ATCGAAGAGC TGGAAGAGAC CGGTGAGCTC AACATGGGTG TGCCGCTCAC CGGCGTAGGG CGCTTTCGCG TCAGCGCGAT GCGCCAGCGC GGCACCTATG CGGTGGTGAT CCGCTTCATC ACGCAGAACA TCCCGCAGTT GTCCACGCTG CACCTGCCGC CGGTGCTCAG CGAGCTGATC ATGGAAAAGC GCGGCCTGAT CCTGCTCGTG GGCGCCACGG GCTCGGGCAA GAGCACGACG CTGGCGGCGA TGCTGGACGC GCGCAACGAG TCCATGACCG GCCACATCCT CACGGTGGAG GACCCGGTCG AATACCAGTT CAAGAACAAG AAGTCCATCG TCAACCAGCG GGAGATCGGC AGCGACACCC AGTCGCTGCA GACCGCGCTC AAGAACGCGC TGCGACAGGC GCCCGACGTG ATCCTGATCG GCGAAATCCG TGACCGCGAG ACCATGTCCG CCGCCATCGC CTACGCCCAG TCGGGCCACC TGTGCCTGGC CACGCTGCAC GGCAACAACA GCTACCACGC CCTCAACCGC ATCCTGTCGT TCTATCCCGT GGAGGTGCGC CCCACGATGC TGGGCGACCT GGCGTCCGCG CTCAAGGCCA TCATCTCGCA GCGCCTGGTA CGCACCACGA CCGGCGAGCG CGTGCCCGCG GCGGAGGTCA TGCTCAACAC CAAGCTGGTG GCCGAGCTGG TGGAAAAGGG CGACTTCTCG GGGATCCGCG AGGCCATGGA AAAATCCATG GCCGAAGGCT CGCAGACCTT CGAGGAAGCG CTGGCCCACC TGATCCTGGA GGGCAAGATC GACCGCAAGG AAGGCCTGGC CTACGCCGAC TCCCCCACCA ACCTCATGTG GCGCCTGCAA AACGACTTCT CGGCTGCCGC GAAGTCGGCG CGCGCCGTCA ACGACGCCGG CCAGCAGTCC GAGGACGATG CCCCCTCGTT CACCGAGATC GTGCTGGACG TCAAGCCCGC CTGA
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Protein sequence | MSTMERILRL MADKKASDVY LSANAPALIK INGECVPINS QILPPDAPKN LLSEIVPPDR IEELEETGEL NMGVPLTGVG RFRVSAMRQR GTYAVVIRFI TQNIPQLSTL HLPPVLSELI MEKRGLILLV GATGSGKSTT LAAMLDARNE SMTGHILTVE DPVEYQFKNK KSIVNQREIG SDTQSLQTAL KNALRQAPDV ILIGEIRDRE TMSAAIAYAQ SGHLCLATLH GNNSYHALNR ILSFYPVEVR PTMLGDLASA LKAIISQRLV RTTTGERVPA AEVMLNTKLV AELVEKGDFS GIREAMEKSM AEGSQTFEEA LAHLILEGKI DRKEGLAYAD SPTNLMWRLQ NDFSAAAKSA RAVNDAGQQS EDDAPSFTEI VLDVKPA
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