| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2026 |
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| Symbol | |
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| ID | 4672607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2133591 |
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| End bp | 2134808 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639839104 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_986278 |
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| Protein GI | 121594382 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.341805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCC GTGGCAGGCA GTTGCAGGCC GCCGACAGCC GTGCCGAGCA GGCGCGCGCA
GGACTGCTGC CCAGCGCCGC GCTGAATGGG GGCGTGACCT ACGCCCGCAC CGACCTGACC
CGTGGCCCCC TGCCCCCGCT GGACCTGCAC GCCCCTACCC AGACCGTGGG CGTGGTGGCC
TCGCAGCCGC TGTACCGGCC GGCCAACCGC ATCGGCTTCG AGCAGGGGCA GCGCGGGATC
GACATTGCCC GCGCGCAGCG TGACGCGGCC GAGCAGGACC TGCTGGTGCG CGTGAGCCAG
GCGTATTTCG ATGTGCTGGC CGCCCAGGAC ACCCTGACCT TCGTGCAGGC CCAAAAGGTT
GCCGTGGCCG AACAACTGGC CGCGGCCAAG CGCAATTTCG AGGTCGGCAC CGCCACGGTG
ACCGACGAGC GCGAGGCCCA GGCGCGGCAC GACCTGGTGT CGGCCCAGGA GATCGCGGCC
GAGAACGACC TGCGCGTCAA GCGCCTGGCA CTGGAGCAGA CCGTGGGCCG CTCGGGCCTG
ACCCCGCTGC CCCTGGCCCA GCCGGTGCAG CTGCCCGCGG TGCAGCCGGC CGATGTGAAC
AGCTGGGTGC ACGTCGCGGA AGATCAGCAA CCCCAGGTGC GCCAGGCGAC CATTGCGCTG
GACGTGGCGC GCCTGGAGAC CGCCAAGGCC GAGACCGGCC ACCTGCCCAC GGTGGACCTG
CAGGCGGGCT ACAGCGTGCA GCGCACGCCC AATGGCACCG TCACCATGCC GGGCGTGCAC
TCCCGGGCCA ACGTCGCCAG CGTGGGTGTG GCGCTCAACC TGCCGCTGTT CGCGGGCTTC
GCGGTGCAAA ACCGGGTGAA GGAAACCCTG TCGCTGGAAG ACAAGGCGCG CGCCGACTTG
GACCATGCGC GCCGCAGCGT GGCCCAGGCC ACGCGCGCCG CGTTCTTCGG CGTGCAGTCG
GGCCAGAGCC AGGTGCGGGC GCTGCAGGCG GCCGAGGCGT CCACCCAGAG CGCGCTGGAA
GCCAACCAGC TGGGCTACGA GGTGGGCGTG CGCATCAACA TCGACGTGCT CAACGCCCAG
AGCCAGCTCT ACCAGACCAA GCGCGACCTG GCCGTGGCAC GCTACAACGT GCTCATGGGC
ACGCTGCGCC TCAAGCAGGC CGCCGGCACC TTGTCCATGG ACGACGTGGT GGCTGTGGAC
AGCCTGCTGA GTCGCTGA
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| Protein sequence | MTPRGRQLQA ADSRAEQARA GLLPSAALNG GVTYARTDLT RGPLPPLDLH APTQTVGVVA
SQPLYRPANR IGFEQGQRGI DIARAQRDAA EQDLLVRVSQ AYFDVLAAQD TLTFVQAQKV
AVAEQLAAAK RNFEVGTATV TDEREAQARH DLVSAQEIAA ENDLRVKRLA LEQTVGRSGL
TPLPLAQPVQ LPAVQPADVN SWVHVAEDQQ PQVRQATIAL DVARLETAKA ETGHLPTVDL
QAGYSVQRTP NGTVTMPGVH SRANVASVGV ALNLPLFAGF AVQNRVKETL SLEDKARADL
DHARRSVAQA TRAAFFGVQS GQSQVRALQA AEASTQSALE ANQLGYEVGV RINIDVLNAQ
SQLYQTKRDL AVARYNVLMG TLRLKQAAGT LSMDDVVAVD SLLSR
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