Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2010 |
Symbol | |
ID | 4673220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2112914 |
End bp | 2113825 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639839088 |
Product | LysR family transcriptional regulator |
Protein accession | YP_986262 |
Protein GI | 121594366 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.199034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTGGG ACAATTTGCG CTACTTTCTG GAGTTGGCGC GCACCGGCAC GCTGGCAGGG GCCGCGCGCC GCACCGGTGT GGAACACACG ACAGTGGCGC GGCGCATCCA GGCGCTGGAA AAACAGATGG GTGCGCCGCT GTTCGCGCGC GAGGCGGCGG GACACCGGCT GACGGAAACC GGCCGCCACC TGCTGCCCGC CGTCGAGGCC ATGGAGGCCG CCGTGCTGGG GGTGGAGCGC GCATCGCCCG CCAACTCCCC GGGCGCGGGC CCCTCCGGAC TGGTGCGCGT GGGTGCCACC GAGGGTTTTG GCACGGTGGT GCTGGCGCCG CACCTGGCGC GGCTCACACA GAAGCACCCG CACTTGTCCA TCGACCTGCT GGCTCTGCCG CGCATGCTGC ACCTGAGCCG GCGCGAGGCG GACATCGTGA TTTCGTTAGA GCGGCCCAAG CGCGGCTCGG TGATCGTCAC CAAACTTGCC GACTACACCC TGCGTCTCTA CGGCCAGCGC GAGTACCTGG CGCGCAGACC GCTGGTGGCC AAGCGTGAAG ACCTGCGCCA CCACGCCTTC ATCAGCTACG TGGACGATCT GCTGTTCACG AAAGAGCTGC AGTTCATCGA CCAGCTCTAC CCGCCCGAGC GTTTTGCGCT GCGCAGCACC AGCATCACCG CGCAGTACGA GGCCGTGCGC GCCGGCGCGG GCCTGGCCGT GCTGCCCGCG TTCCTGGCCG ACCGTGACCC TGTACTTGCG CGCGTGCTGC CCCACGAGGC CGAGTTCACA CGCACCTTCT GGATGAGCAT GCCGGCCGAG TCCAAGCACT TGGCGCGCAT GCAGGCGGTG TGGGCCTTCC TGAAAGACGT GGGCCAGCGC GAGGCAGCAT CGCTGGCCCC AGGTAAACCA GCGGCAGGCT AG
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Protein sequence | MDWDNLRYFL ELARTGTLAG AARRTGVEHT TVARRIQALE KQMGAPLFAR EAAGHRLTET GRHLLPAVEA MEAAVLGVER ASPANSPGAG PSGLVRVGAT EGFGTVVLAP HLARLTQKHP HLSIDLLALP RMLHLSRREA DIVISLERPK RGSVIVTKLA DYTLRLYGQR EYLARRPLVA KREDLRHHAF ISYVDDLLFT KELQFIDQLY PPERFALRST SITAQYEAVR AGAGLAVLPA FLADRDPVLA RVLPHEAEFT RTFWMSMPAE SKHLARMQAV WAFLKDVGQR EAASLAPGKP AAG
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