Gene Ajs_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1997 
Symbol 
ID4673581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2098185 
End bp2099189 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID639839075 
Producthypothetical protein 
Protein accessionYP_986249 
Protein GI121594353 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.02937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.517294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCC GCACCTTGAT CAAAAGCTCC CTCGCCGCCG CCAGCGCCTT GCTGCTGGGC 
AGCGCATTGA CCCCTTTGCC TGCAGCAGCG CAGGGCACTT GGCCCGCGGG CAAGGCCATC
ACCTACCTGG TGCCCTTTCC ACCCGGCGGT AATACCGACA CGCTGGCTCG CGTGGTAGCC
CAGCCTCTGG GCCAGGCCCT GGGCACGCCC GTGGTCATTG ACAACAAGGG CGGCGCGGGC
GGTAGCGTGG GATCGGCCAT CGCCGCGCGC GCGCCCGCCG ACGGCTACAC CATCCTTGGC
GGCACCATCA GCTCGCACGC CATCAACGTG AGCCTGTACC CCAAGCTGGA CTACGACCCC
GTCAAGTCCT TCACACCGAT TGCCATGCTG GGCTCGGGTC CGCTGGTGCT GGTGGTGCCC
GCCGCCAGCC CGTACAAGAC GCTTGCGGAA GTGCTCGCCG CCAGCAAGGC CAAGGCCGCG
GCGGGCGGCC TGTCCTCGGC GTCGCCCGGC AGCGGCACCT CCAACCACAT GGCGCTGGAG
CTGCTGGCCT ATCAGACGGG CGTGAAGTTC ACGCATGTGC CGTACAAGGG CAGCGGCCCG
GCCGTGCAGG ACGTGATCGG TGGACAGGTG GACATGATGT TCGACACCGC CCTGGTCGTA
GGCCCGCACA TCCAGTCGGG CAAGCTGCGC CCCATCGCCG TGACCAGCTC CAAACGCGTG
GAGTCGCTGC CCGACGTGCC CACCATTGCC GAAGCCGGAG AAAAAGGCTT CGACATGGGC
TCCTGGCAGG CCGTGTTCGC GCCCGCCGGC ACACCCAAGC CCATCGTGGA CCGACTGCAC
GCCGAGATCA TGAAGATCGT CGCCACCCCG GAAGTCCAGG CGCGCCTCAA AGCCTTCGGC
ATGGTGCCAT CCACCATGAC GCCCGCCGAA CTGGCCACAT TCCAGAAAGC GGAGGTGGCC
AAGTGGGCGC AGGTGATCAA GGCCGCAGGC ATAAAGGCGG AATGA
 
Protein sequence
MQRRTLIKSS LAAASALLLG SALTPLPAAA QGTWPAGKAI TYLVPFPPGG NTDTLARVVA 
QPLGQALGTP VVIDNKGGAG GSVGSAIAAR APADGYTILG GTISSHAINV SLYPKLDYDP
VKSFTPIAML GSGPLVLVVP AASPYKTLAE VLAASKAKAA AGGLSSASPG SGTSNHMALE
LLAYQTGVKF THVPYKGSGP AVQDVIGGQV DMMFDTALVV GPHIQSGKLR PIAVTSSKRV
ESLPDVPTIA EAGEKGFDMG SWQAVFAPAG TPKPIVDRLH AEIMKIVATP EVQARLKAFG
MVPSTMTPAE LATFQKAEVA KWAQVIKAAG IKAE