Gene Ajs_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1982 
Symbol 
ID4674399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2083897 
End bp2084868 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content68% 
IMG OID639839060 
Productglutamate--tRNA ligase 
Protein accessionYP_986234 
Protein GI121594338 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.193008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.926165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAG CCGCGGGCTA CGTCGGCCGC TTTGCCCCCT CTCCGACCGG CCCGCTGCAC 
GCGGGCTCGC TCGTCGCCGC CCTGGCCAGC TGGCTGGACG CGCGCGCGGC CCTTGGAGGA
CGCGGCGGGC GCTGGCTGGT GCGCATCGAA GACGTGGACC CGCCGCGCTG CGTGCCCGGC
GCCGACGAGC GCATTCTGGC GCAGCTGGCC CGCTGCGGCC TGCTGCCCGA CGAGCAGCCG
CTGTACCAAT CCACCCGCGG CCCCCGCTAC CAGCAGGCGC TGGATGGGCT GCTCCACGCC
GGCCTGGCCT ACCCATGCGC ATGCACGCGC CGCGACATCG AAGCCGCCTT GCAGGCGCAG
GGCCTGGTGC ATGAACGCCA TGTGGAACGC CCCTACCCTG GCACCTGCCG CGACGGCCTG
GGTGGACGCA CGCCGCGCGC CTGGCGCTTC GATACCCAGC GGTATCAATC AAAAATGCCT
CCAGCGCCCA TCCAGCAAGC GCAAACAGCT ATTTATTCAA TAGCAAATTC CGGCGTCTCC
TGGACCGATC GACGCCTGGG CCCGCAGTTT CAGGATGTGG CGCGGCAAGT GGGCGACTTT
GTGCTGCGGC GTGCAGATGG CCTGTGGGCC TACCAGCTTG CGGTCGTGGT CGACGACGCC
GACCAGGGCG TCACCCATGT GGTACGCGGC GAAGACCTGG CCGACAACAC GCCGCGCCAG
ATCCTGCTGC AGTCCGCATT GGGCGTGCCC ACGCCGCAGT ACCTGCATAC GCCCCTGGTA
CGTGCGGCGG ATGGCGAGAA GCTCTCCAAA CAACATGGCG CTCCCCCCAT CGACGACAGC
CAGCCGCTGC AGGCTTTGAC AAATGCAGCC CAGGTACTGG GATTGCCGTC ACCTACAGGC
ATAGCAGGCA TCCCCGATGC GCTCGCATTC TGGGTCAAGG CATGGCCTGG AACCTACAAT
TCGCCGCTGT GA
 
Protein sequence
MTAAAGYVGR FAPSPTGPLH AGSLVAALAS WLDARAALGG RGGRWLVRIE DVDPPRCVPG 
ADERILAQLA RCGLLPDEQP LYQSTRGPRY QQALDGLLHA GLAYPCACTR RDIEAALQAQ
GLVHERHVER PYPGTCRDGL GGRTPRAWRF DTQRYQSKMP PAPIQQAQTA IYSIANSGVS
WTDRRLGPQF QDVARQVGDF VLRRADGLWA YQLAVVVDDA DQGVTHVVRG EDLADNTPRQ
ILLQSALGVP TPQYLHTPLV RAADGEKLSK QHGAPPIDDS QPLQALTNAA QVLGLPSPTG
IAGIPDALAF WVKAWPGTYN SPL