| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1977 |
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| Symbol | |
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| ID | 4673877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2075379 |
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| End bp | 2077232 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639839054 |
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| Product | phage integrase family protein |
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| Protein accession | YP_986229 |
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| Protein GI | 121594333 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.602154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCT CAGACCTGGC CGTTCGACAG GCCAAGGCAA CCGGCAAGGC ATACACCCTC
CCTGACTTGG ATGGCCTCTC CCTGGCCGTC ACCGCTGCAG GGGGCAGGAC TTGGCACTTC
CGCTACTACT GGGCGGGCAA GCAGAAGCGG ATGTCGCTCG GCACCTACCC GGAGGTGACG
CTTCGCGAGG CCCGCAGCCT GCGCGACGAA GCGCGCGCCC TGCTGGCCAA AGGCACCAAT
CCTCGCGTAC ACCGCAAGCA GAAGCGCACT GCTGTCCGGC TCGCCGACGA AAACACCTTC
GAGGCGGTGT ATCGCAAGTG GCTCAAGCAT CGCGGGCTCA CCCTCAAGGA AGGCCGGCAG
ACGACCCTCT CGATACTTCC GCGCATCTTC GACAAGGATG TGCTGCCCAC CTTGGGCAAA
CGGTCGATCT ATGAGATCAA GCGTCCCGAC CTCTTGGAGG TGATCGCCAA GATCGAGAAG
CGCAGGGCGC TCTCCGTCGC CGAGAAAGTC AGGACGTGGT TCAACCAACT GTTCCGCTAC
GCGCTGGTGA TCGTGCCGGG CCTGGAGCAG AACCCTGCCT CCGATCTCGA TGTGGTGGCG
CTGCCGCTGC CACCCGTCAA CCACAACCCG TTCCTGCGCA TGGCCGAGCT GCCGAAGCTG
TTGCAGAGGC TGCGCAGCTA TCGCGGCAGG CGGCAGACCC AGCTCGGGCT GCGGCTATTG
CTGCTGACCG GCGTGCGAAC CGGCGAGCTG CGACAGGCGA CGCCGGATCA ATTCGATCTG
GACCGCGGGC TGTGGATCAT CCCGCCCGAC GTCGTGAAGC AACTCCAGTT GGATATGCGC
AAGAAGCGGC AGCAGCCAAA GGACATCCCG CCCTACATCG TGCCGCTGTC GATTCAGGCC
ATGGAGATCG TCCGGCACCT GCTGGATGAG TTCAAGCCGG CCCAGCGCCA CCTGTTCCGA
CACGACAGCG ACTTGAAGAA GCGCATCAGC GAGAACACGC TCAATGGTGC GCTCAAACGC
ATGGGCTATC AGGAACGCCT GACCGGACAC GGTATCCGCG GCACGATGTC CACTGCGCTC
AACGAGATCG GCTACCCGAA GGTCTGGGTG GATGCACAGC TCTCGCATGT CGATCCCAAC
AAGGTCAGCG CGACCTACAA CCATGCCGAG TACGTGGAGC AGCGTCGCCG CATGATGCAG
GACTGGGCCG ATCGGCTCGA CCTCTTCGAG CAGAACCAGG TCGAGGCGGC CAGCATGCCG
CTCACCGTGC ATCTGGAAGG CGTTCCCGCG TTCCCGAATG AGCAAACCGC AAGCGCACCC
TCCACGCCGG TTGCCGCTTC GCCAATCCTG CTCGTGACGA AGCCCGGCGA CGCCATGCCG
TTGGTTTCTG CCGCCGCACA TCGGCTGCCG GCGGTTCCGC CCCCTCGATC GGCCGCGCCG
CTGGTGCCTT CGGACATTCA GCGCGAGAGG ATGGAGCTGT TCGATGTCTT CGAGGCGCCG
CACAACCTTC CCGTCGCTGC GTTTGCGAAG ATGGCGGGCA AGTCCCGCAG GTGGATCAGC
TACGAGATCA AGGCGGGCAA CTTGCTGGCG TTGAACGTGG GCAACCGCGG CCAGCGGGTG
CCGGACTGGC ACCTCGACCC ACTCAAGCAC GAGCTGATCC AGTCCGTCCT CAAGCTGACC
AGGGGTGCCG ACCCTTGGCA GATCTACCAT GCACTGCTGC AGCCGCGCTC GATGCTGCGG
GGGCGTTCGG CACTGGAGGG CGTGACGGCC AGCAATCTCG ACAAGCTCGT CATGGCAGTG
AGCACAGCCG TGAAGGAAAG CGAGTGGTCC CCGCAGCAGG CGAGGTTGGC CTGA
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| Protein sequence | MALSDLAVRQ AKATGKAYTL PDLDGLSLAV TAAGGRTWHF RYYWAGKQKR MSLGTYPEVT
LREARSLRDE ARALLAKGTN PRVHRKQKRT AVRLADENTF EAVYRKWLKH RGLTLKEGRQ
TTLSILPRIF DKDVLPTLGK RSIYEIKRPD LLEVIAKIEK RRALSVAEKV RTWFNQLFRY
ALVIVPGLEQ NPASDLDVVA LPLPPVNHNP FLRMAELPKL LQRLRSYRGR RQTQLGLRLL
LLTGVRTGEL RQATPDQFDL DRGLWIIPPD VVKQLQLDMR KKRQQPKDIP PYIVPLSIQA
MEIVRHLLDE FKPAQRHLFR HDSDLKKRIS ENTLNGALKR MGYQERLTGH GIRGTMSTAL
NEIGYPKVWV DAQLSHVDPN KVSATYNHAE YVEQRRRMMQ DWADRLDLFE QNQVEAASMP
LTVHLEGVPA FPNEQTASAP STPVAASPIL LVTKPGDAMP LVSAAAHRLP AVPPPRSAAP
LVPSDIQRER MELFDVFEAP HNLPVAAFAK MAGKSRRWIS YEIKAGNLLA LNVGNRGQRV
PDWHLDPLKH ELIQSVLKLT RGADPWQIYH ALLQPRSMLR GRSALEGVTA SNLDKLVMAV
STAVKESEWS PQQARLA
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