Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1834 |
Symbol | |
ID | 4672032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1913004 |
End bp | 1914155 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639838922 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_986097 |
Protein GI | 121594201 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.41663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.322468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTC CCCGTCTGCA GCGCCGCACG CTGGCGCTGA TCGCCGTCAT TGCGCCGCTG GTGGCGCTGT TCGTCTATGT CGCTCTGCGT TCGGGGCCGC TGGCGCCCGT GGCGGTCACG CTGGGCAGCG TGCAATCGCG CGCCATTGCC CCGGCACTCT CGGGCATCGG CACGGTGCAG GCGCGGTATC TGTACAAGAT CGGCCCCACC TTCGCGGGGC GCGTGCAGCG CCTGGACGTG CAGGTGGGCG ACAGGGTTGA GGCTGGGCAG GTGCTGGGCG AAATGGACCC GGTGGACCTG GACGACCGCG TGCGCGCACA GCAGGCGGCC ATTAAGAGCG CCGAAGCCGC GCTGCGCCAG GCAGAGGCCA GGCAGAGCTA TGCGCAGACC CAGCACCAGC GCTACGGGCA ACTGGTGGCG GTGCGCGGCA CCAGCGAGGA AAGCTACGCC ACCAAGCAGC AGGAACTGGC CGTGGCAGAC GCCGCGCTGG CCGCTGCCCG CGAGGATGCG AGCCGTCTGC GCGCTGACTT GCAGGCATTG CGCGCGCAGC GTGGCAACCT GCGGCTGGTG TCGCCCGTGG CCGGCATGGT GGCTGCGCGC GATGCCGACC CTGGCACGAC CGTGGTGGCG GGGCAGGCGG TGGTAAAGCT CATCGACCCG GCCAGCCTGT GGATCGACAC GCGCTTTGAC CAGATCACCG CCCAAGGGTT GGCGGCGCAG CTACCGGCCG AGGTGGTGCT GCGCTCGCGC CGCGGGGACA ACCTGGTCGG CAGCGTGCTG CGCGTCGAGC CCCTGGCGGA CGCGGTGACA GAGGAGACGC TGGCCAAGAT CGTCTTCGAT GCACCGGTTA CACCGCTGCC CCCCGTCGGT GAACTGGCCG AGGTCACCGT GCGCCTGCCG GCACTGCCCG AAGCGCCCAC CATCCCCAAT GCGGCCATCC GCTTCGTGGA CGGGCAGCGC GGCGTGTGGA AGCTGGTCGG TGGCAAGCCG CAGTTTGCGC AGGTACGCCT GGGCCGTGCG GACCTCGACG GCCATGTGCA GGTGCTGGAC GGGCTGGCCG TGGGCGACTC CATCGTGGTG TACAGCGAGA GGGCGCTCAC GGCGCGCAGC CGCGTGCACG TGGTCGAGCG CATTGCCGGG GTGGCGCCTT GA
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Protein sequence | MKFPRLQRRT LALIAVIAPL VALFVYVALR SGPLAPVAVT LGSVQSRAIA PALSGIGTVQ ARYLYKIGPT FAGRVQRLDV QVGDRVEAGQ VLGEMDPVDL DDRVRAQQAA IKSAEAALRQ AEARQSYAQT QHQRYGQLVA VRGTSEESYA TKQQELAVAD AALAAAREDA SRLRADLQAL RAQRGNLRLV SPVAGMVAAR DADPGTTVVA GQAVVKLIDP ASLWIDTRFD QITAQGLAAQ LPAEVVLRSR RGDNLVGSVL RVEPLADAVT EETLAKIVFD APVTPLPPVG ELAEVTVRLP ALPEAPTIPN AAIRFVDGQR GVWKLVGGKP QFAQVRLGRA DLDGHVQVLD GLAVGDSIVV YSERALTARS RVHVVERIAG VAP
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