| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1816 |
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| Symbol | |
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| ID | 4674316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1888042 |
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| End bp | 1888908 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639838904 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_986079 |
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| Protein GI | 121594183 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00317647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.851658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC ACGACACCGT GTATGCCTGC ATCGACGGGC TGGCCACCAC CCACGCCGTG
GTGGACGGGG CCCTGTGGGC CGCGCAGCGC CTGCAGGCCC CCCTGGCGCT GCTGCACGCA
CTGGAGCGGC CTGAACCCAT GCCGCCCGTG GGCGACTACA GCGGCGTCAT CGGCATGGGC
GCGCAGGACC TGCTGCTGCA GCGCCTGAAT ACCCTCGATG AAGAGCGCAG CCACGTCGCT
CAGGAGGCCG CGCGCCGCAT GCTGGCCGAG GCCCAGGCGC GCGTGGATGC CGCCCGCGTG
CCGTCGCTGC AGGCGCTGCT GCGCCAGGGC GAGCTGACCG ACGTGCTGCT GGAGCACGAA
CCCAGCGCGC GCCTGTTCGT GCTGGGGCGC CAGCACCGCG CCACCGCCGC GCGCAAGCTG
CGGCTGGACT ACCGTGTGGA AGGCGTGGTG CGCAACGTGC GCCAGCCGGT GATGGTGGTG
ACCATGCCGG AGTTCGTGGC GCCGGCGGGC TTCGTCGTGG CCTTTGACGG CAGCGCCACC
GCGCGCCGCG CCGTAGAGGC CGTGGGCCGC AGCCCGCTGC TGCGCGGCAT GCCCGGCCTG
TTGGCCCTGG CCGGCGAGCC CACGCTGGAG ATGCTGGAAG CGCTGCAAAG CGCCCAGTCA
TACCTGGAGG CCACAGGCTT CGACATCACC ACGCAGATCG TGCCGGGCGT GCCGGAGGAG
GCGCTGCCGG CCCTGCTGCA GTCGCACGGC AACGTACTGC TGGTGCTGGG CGCCTACGGG
CACTCGCGCA TCCGCCAGCT CATCGTCGGC AGCACCACCA CCGCGCTGCT GCGGCTGTGC
AGCGTGCCGG TGCTGGTGCT GCGCTGA
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| Protein sequence | MNTHDTVYAC IDGLATTHAV VDGALWAAQR LQAPLALLHA LERPEPMPPV GDYSGVIGMG
AQDLLLQRLN TLDEERSHVA QEAARRMLAE AQARVDAARV PSLQALLRQG ELTDVLLEHE
PSARLFVLGR QHRATAARKL RLDYRVEGVV RNVRQPVMVV TMPEFVAPAG FVVAFDGSAT
ARRAVEAVGR SPLLRGMPGL LALAGEPTLE MLEALQSAQS YLEATGFDIT TQIVPGVPEE
ALPALLQSHG NVLLVLGAYG HSRIRQLIVG STTTALLRLC SVPVLVLR
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