| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1787 |
|---|
| Symbol | |
|---|
| ID | 4672826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1855225 |
|---|
| End bp | 1856151 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639838875 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_986051 |
|---|
| Protein GI | 121594155 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.23579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTGACGT GGCGCAGGCT CTGGCGTTGC CGCGGCTGCG TTGAATGCGC TGCGGCTTGG
CCGATAATTT TTGCCATGAA CCAAGAGACA CAGACGCCCG GCGGTGGCCG GCGCTATGCG
CGCGTGTTGA CCATCGCGGG CTCGGACAGT GGCGGCGGCG CGGGCATTCA GGCCGACCTG
AAGACCTTCA GCGCCCTGGG CTGCTACGGC ATGACCGCGA TCACCGCCAT CACCGCGCAG
AACACGCGCG GCGTGACGGG CATCCACGGC ATTCCGCCCG AGATGCTGCG CGCACAGATC
GACGCCGTGG TCGAGGACAT CGGCGTGGAT GCGGTGAAGA TCGGCATGCT GCATTCGCCT
GAGGTGGTGC AGGTGGTGGC CGACGCGATT CTTCGCCATG GCTTGCCCAA CGTGGTGCTG
GACCCGGTGA TGGTCGCCAC CAGCGGCGAC CGGCTGATTG CCGAGGAGAC CGTGGGCACG
CTGGTGCGCG CGCTGTTCCC GCTGGCCGCC GTGGTCACCC CCAACCTGGA CGAGGCCGGC
TGGCTGCTGG GCCGCGCCAT TGCCGACGAA AGCGCGCTGG ACGCGGCCGC CACCGACTTG
CTGGCGCTGG GCGCGCGCGC GGTGCTGCTC AAGGGCGGGC ACCTGCCGGG CGACCGGGTG
GTGGATGTGC TGGCCCTGCC TGGCGGCGAG CGCCACCGCC TGGAAGCTGC GCGCATCGTC
ACGCACAACG GCCACGGCAC GGGCTGCACT TTGTCGTCGG CGATCGCTGC GCATCTCGCA
TTGGGCCAGC CGCTGGCGCA GGCGGTGCGG TTGGCTCGCC AGTACATTCT GGGCGCGATC
GCTGCGGGGG CCGATGTGCG CACCGGCCAC GGCCACGGGC CGCTCAACCA TGGCTATGCG
CCGGTGGCGC AGCGTGTGAT CGAGTAA
|
|---|
| Protein sequence | MLTWRRLWRC RGCVECAAAW PIIFAMNQET QTPGGGRRYA RVLTIAGSDS GGGAGIQADL
KTFSALGCYG MTAITAITAQ NTRGVTGIHG IPPEMLRAQI DAVVEDIGVD AVKIGMLHSP
EVVQVVADAI LRHGLPNVVL DPVMVATSGD RLIAEETVGT LVRALFPLAA VVTPNLDEAG
WLLGRAIADE SALDAAATDL LALGARAVLL KGGHLPGDRV VDVLALPGGE RHRLEAARIV
THNGHGTGCT LSSAIAAHLA LGQPLAQAVR LARQYILGAI AAGADVRTGH GHGPLNHGYA
PVAQRVIE
|
|---|
| |