| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1755 |
|---|
| Symbol | |
|---|
| ID | 4671486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1820420 |
|---|
| End bp | 1820980 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639838843 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_986019 |
|---|
| Protein GI | 121594123 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0946403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.917743 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTGT CATCCCCTGC CCCCCGCACT GCCCGCCATG TCCGACGCGT CACCTACCAG
GGTTACGAGC GCGAAGACGG GCTCTGGGAC ATCGAGGGCG AGCTGCACGA CAGCAAGCCG
CAGGACCTGC CGTCGCTGCG CTACCCGGAC GGCGTGCGCC GCGCGGGCGA ACCCATCCAC
CACCTGTGGC TGCGCGTCAC CGTGGACCGC GACCTGGTGG TGCGCGCCAT CGAATCCGCC
ATGGATGCCC ACCCCCTGGC GGGCTGCACA CAAGCGCAGC GCGCCCTGCA GGCGATGGTG
GGCTGCAGCA TGGCGCGCGG CTGGCGCCAG TCCATCCAGA CCCACCTGGG CGGCGTAGCC
GGTTGCACCC ATCTGCGGGA ACTGCTGTTC AACCTGGCCA CGGCCACGTT CCAGACGATT
CACGCCGCAT TCCAGAATGA AGGCGACGAG CCGCCACGCC ACTTGGGCCA GTGCACGGGT
TGGGACTTCA GCGGTCAAGG AGTGAAGGAG CACTACCCGC AGTTCTACGG CCGCGCGCCG
CGCGTGCCGA AGGCAGCCTG A
|
|---|
| Protein sequence | MPLSSPAPRT ARHVRRVTYQ GYEREDGLWD IEGELHDSKP QDLPSLRYPD GVRRAGEPIH
HLWLRVTVDR DLVVRAIESA MDAHPLAGCT QAQRALQAMV GCSMARGWRQ SIQTHLGGVA
GCTHLRELLF NLATATFQTI HAAFQNEGDE PPRHLGQCTG WDFSGQGVKE HYPQFYGRAP
RVPKAA
|
|---|
| |