Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1725 |
Symbol | |
ID | 4672012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1794165 |
End bp | 1794950 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639838814 |
Product | TPR repeat-containing protein |
Protein accession | YP_985991 |
Protein GI | 121594095 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.039074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCA TGTCTTTGCT CCTGCGCCCG CGGGCGCTGG GCGCGGCGGC GCTGGCCGCC GCTGCCTGCT GGTCGACCCC CAGCTATGCA TTGTTCGAGG ACAGCGAGGC GCGCCGTGCC ATCCTTGAGA TGCGCCAGCG TGTCGATGCA TTGACACAGG CCAGCCAGCG TGCGGGTGAA CGGTCCGGTG ATGAGGTCTC GCAACTACGG CGCAGCCTGC TCGACCTACA GATGCAAATC GAGGCATTGC GCACTGAACA GGCGACACTG CGTGGTCAGA ACGAGCAGCT ATTGCGCGAT GTCGCAGAGC TGCAGCGCCG TCAGAAGGAC ATGGCACAGG GTGTCGATGA GCGGTTGCGC CAGTTTGAGC CCGCGACGGT GACGCTGGAC GGGCGCGAAT TCCGGGCTGA TCCTGCAGAG AAGCGTGATT TCGAGGCGGC CTTGGCGCTC TTCCGTGCAG GTAAGTTTGG TGAAGCGTCC AACGCTTTCA GCGGCTTCGT GCGCCAGTAT CCACAGTCCG GTTATGTACC GTCTGCCCGT TTTTGGCTGG GCAATGCACA GTACGCCACG CGTGATTACA AAGAGGCCAT CAACAACTTC AAGGCTCTGT TGTCGGCGGC GCCAGACCAT GCGCGCGCTC CCGAGGCGGC CCTCTCGATT GCCAATTGCC AGATCGAATT GAAAGATACG CGGGCTGCGC GCAAGACCCT GGAAGACTTG CTGCGCGTTT ATCCGCAGTC GGAAGCGGCA GCCGCTGCGA AGGAACGCCT GGCGCGCCTG AAGTGA
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Protein sequence | MPRMSLLLRP RALGAAALAA AACWSTPSYA LFEDSEARRA ILEMRQRVDA LTQASQRAGE RSGDEVSQLR RSLLDLQMQI EALRTEQATL RGQNEQLLRD VAELQRRQKD MAQGVDERLR QFEPATVTLD GREFRADPAE KRDFEAALAL FRAGKFGEAS NAFSGFVRQY PQSGYVPSAR FWLGNAQYAT RDYKEAINNF KALLSAAPDH ARAPEAALSI ANCQIELKDT RAARKTLEDL LRVYPQSEAA AAAKERLARL K
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