Gene Ajs_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1700 
Symbol 
ID4673806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1766833 
End bp1767738 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content71% 
IMG OID639838789 
Producthypothetical protein 
Protein accessionYP_985966 
Protein GI121594070 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA ACTTCGCCGG CAAGACCGCC GTGCTCACGG GGGCGGGCTC GGGCTTTGGC 
CTGGAGTGCG CCCGCATCGG CGCGCGCCTG GGCATGAACC TGGTTCTGGT GGACGTGCAG
CAGGACGCGC TGGAGCGCGC CGCCGTGGAG CTGGCAGCCG CTGGCGCCCC CGTGCTGGCG
CGCCGGGTGG ACGTGTCCAA CGCCGCGCAG ATGGAGCAAC TGGCGCAGGA CGTGGTGCAG
CACTTCGGCG CGCCGCACCT GGTGTTCAAC AACGCGGGCG TGGGATCGGG CGGGCTGGTG
TGGGAGAACT CGGCCCGCGA CTGGGAATGG GTGCTGGGCG TGAACCTCAT GGGCGTGGTG
CACGGCGTGC GCCTGTTCAC CCCGCTGATG CTGCAGGCCG CCAAGGACGA CCCCGCCTGG
CGCGGGCACA TCGTCAACAC CGCCAGCATG GCCGGCCTGC TGGCCCCGCC CAACATGGGC
ATCTACAACG TCAGCAAGCA CGCCGTGGTG GCACTGAGCG AGACGCTGTA CCAGGACCTG
GCGCTGGTCA CCGACCAGGT GGGCGCCAGC GTGCTGTGTC CGTATTTCGT GCCCACGGGC
ATCAGCCAGA GCGAGCGCAA CCGCCCTCAG GTGCTGGCGG ACGAGCGGCC CACCAAGAGC
CAGCTCATCG GCCAGGCCAT GATCGGCAAG GCCGTCACCA GCGGCAAGGT GACGGCCGCC
GAGGTGGCGC AGAAGGTCTT CGACGCCGTG GCGGCGGGGC AGTTCTACAT CTACAGCCAC
CCGCAGGCGC TGGGGGCCGT GCGCACGCGC ATGGAAGACG TGGTGCAGGC ACGCAACCCC
ACCGACCCGT TCGCGGACAA ACCCGAGCTG GGGGCGCAAC TGCGGGCGGC GTTGCGCGCG
CAGTGA
 
Protein sequence
MIDNFAGKTA VLTGAGSGFG LECARIGARL GMNLVLVDVQ QDALERAAVE LAAAGAPVLA 
RRVDVSNAAQ MEQLAQDVVQ HFGAPHLVFN NAGVGSGGLV WENSARDWEW VLGVNLMGVV
HGVRLFTPLM LQAAKDDPAW RGHIVNTASM AGLLAPPNMG IYNVSKHAVV ALSETLYQDL
ALVTDQVGAS VLCPYFVPTG ISQSERNRPQ VLADERPTKS QLIGQAMIGK AVTSGKVTAA
EVAQKVFDAV AAGQFYIYSH PQALGAVRTR MEDVVQARNP TDPFADKPEL GAQLRAALRA
Q