Gene Ajs_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1682 
Symbol 
ID4672591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1746137 
End bp1746919 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID639838772 
ProductABC transporter related 
Protein accessionYP_985949 
Protein GI121594053 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACC AGGCAACCTA TGCGCTGGAG CTGCGCGACC TGCGCAAGAG CTTCGGCAAG 
ACCGAGATCA TCCGCGGCGC CAACCTGGCG GTACGGCCCG GCGAACGCGT GGCTGTCATC
GGACCCAACG GCGCGGGCAA GTCCACGCTG TTCAACCTCG TCAGCGGGCG GTTCGCGCCC
ACCAGCGGCG AGGTGCTGCT GCACGGCGCG CGCATCGACG GCAAGCAGCC GTTCGAGATC
AACCGCATGG GGCTGTCGCG CAGCTTCCAG ATCACCAACA TCTTTCCCAA GCTCAGCGTG
TTCGAGAACC TGCGCTGCGG CGTGCTGTGG AGCCTGGGGT ACCGCTATGC GTTCTGGCGC
TTCCTGTCCA GGTTGCAGGA TGCCAACGAC CGGGCCACGC AGCTCATGGA GATGATCAAG
CTGGACAAGA AGCGTGACAC CCTGGCCATG AACCTGACCT ATGCCGAGCA GCGCGCTCTG
GAGATCGGCA TCACCATTGC CGGCGGCGCC AGCGTGATCC TGCTGGATGA GCCCACTGCG
GGCATGAGCA AGAGCGAGAC CACGCGCTTC ATCCACCTCA TCAAGGAGGT CACGCAGGGC
CGCACCTTGC TGACCGTGGA GCACGACATG GGCGTGGTCT TCGGCCTGGC CGACAAGATC
GCCGTGGTGG TGTATGGCGA GGTGATCGCC TTCGACACAC CCGAGAACGT GCGCGCCAAC
CCGCGCGTGC AGGAAGCCTA CCTGGGCTCC GTCATTGCCG CGCAGCAGGC CGGGGGACAT
TGA
 
Protein sequence
MADQATYALE LRDLRKSFGK TEIIRGANLA VRPGERVAVI GPNGAGKSTL FNLVSGRFAP 
TSGEVLLHGA RIDGKQPFEI NRMGLSRSFQ ITNIFPKLSV FENLRCGVLW SLGYRYAFWR
FLSRLQDAND RATQLMEMIK LDKKRDTLAM NLTYAEQRAL EIGITIAGGA SVILLDEPTA
GMSKSETTRF IHLIKEVTQG RTLLTVEHDM GVVFGLADKI AVVVYGEVIA FDTPENVRAN
PRVQEAYLGS VIAAQQAGGH