Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1682 |
Symbol | |
ID | 4672591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1746137 |
End bp | 1746919 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639838772 |
Product | ABC transporter related |
Protein accession | YP_985949 |
Protein GI | 121594053 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGACC AGGCAACCTA TGCGCTGGAG CTGCGCGACC TGCGCAAGAG CTTCGGCAAG ACCGAGATCA TCCGCGGCGC CAACCTGGCG GTACGGCCCG GCGAACGCGT GGCTGTCATC GGACCCAACG GCGCGGGCAA GTCCACGCTG TTCAACCTCG TCAGCGGGCG GTTCGCGCCC ACCAGCGGCG AGGTGCTGCT GCACGGCGCG CGCATCGACG GCAAGCAGCC GTTCGAGATC AACCGCATGG GGCTGTCGCG CAGCTTCCAG ATCACCAACA TCTTTCCCAA GCTCAGCGTG TTCGAGAACC TGCGCTGCGG CGTGCTGTGG AGCCTGGGGT ACCGCTATGC GTTCTGGCGC TTCCTGTCCA GGTTGCAGGA TGCCAACGAC CGGGCCACGC AGCTCATGGA GATGATCAAG CTGGACAAGA AGCGTGACAC CCTGGCCATG AACCTGACCT ATGCCGAGCA GCGCGCTCTG GAGATCGGCA TCACCATTGC CGGCGGCGCC AGCGTGATCC TGCTGGATGA GCCCACTGCG GGCATGAGCA AGAGCGAGAC CACGCGCTTC ATCCACCTCA TCAAGGAGGT CACGCAGGGC CGCACCTTGC TGACCGTGGA GCACGACATG GGCGTGGTCT TCGGCCTGGC CGACAAGATC GCCGTGGTGG TGTATGGCGA GGTGATCGCC TTCGACACAC CCGAGAACGT GCGCGCCAAC CCGCGCGTGC AGGAAGCCTA CCTGGGCTCC GTCATTGCCG CGCAGCAGGC CGGGGGACAT TGA
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Protein sequence | MADQATYALE LRDLRKSFGK TEIIRGANLA VRPGERVAVI GPNGAGKSTL FNLVSGRFAP TSGEVLLHGA RIDGKQPFEI NRMGLSRSFQ ITNIFPKLSV FENLRCGVLW SLGYRYAFWR FLSRLQDAND RATQLMEMIK LDKKRDTLAM NLTYAEQRAL EIGITIAGGA SVILLDEPTA GMSKSETTRF IHLIKEVTQG RTLLTVEHDM GVVFGLADKI AVVVYGEVIA FDTPENVRAN PRVQEAYLGS VIAAQQAGGH
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