Gene Ajs_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1612 
Symbol 
ID4674223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1666746 
End bp1667171 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content69% 
IMG OID639838702 
Productclass I peptide chain release factor 
Protein accessionYP_985881 
Protein GI121593985 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.554845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCG GCAATCCTTC TTCCGGCGTG CGCGTGGACC CGGCCGAGGT CGAACTTACT 
GCCATGCGCG CCCAGGGGGC GGGCGGGCAG AACGTGAACA AGGTGTCCAG CGCCGTGCAC
CTGCGCTTCG ACATCGCGGC CTCTTCATTG CCTGAAGATG TGAAACAGCG CCTGCTGGCC
CTGCGCGACA GCCGCATCAC TCAGCAGGGG GTATTGGTCA TCAAGGCACA GCAATACCGC
ACCCAGGAGG CCAACCGCCT GGATGCGTTG GCGCGCCTGC AGGCGCTGGT GGACAGCGTG
GCGCGGCCGC CGCGCGTGCG ACGTGCCACG CGGCCCACGC TGGGATCGCA GCAGCGGCGG
CTGGAGTCCA AAAGCCGGCG CGGAGGTGTC AAGGCATTGC GCGGGCGGCC CCATCTGGGA
GAGTGA
 
Protein sequence
MASGNPSSGV RVDPAEVELT AMRAQGAGGQ NVNKVSSAVH LRFDIAASSL PEDVKQRLLA 
LRDSRITQQG VLVIKAQQYR TQEANRLDAL ARLQALVDSV ARPPRVRRAT RPTLGSQQRR
LESKSRRGGV KALRGRPHLG E