Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1578 |
Symbol | |
ID | 4671533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1631235 |
End bp | 1636163 |
Gene Length | 4929 bp |
Protein Length | 1642 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639838665 |
Product | helicase domain-containing protein |
Protein accession | YP_985847 |
Protein GI | 121593951 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG4646] DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.149983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTAT TCAGTGCATC GCCTCCCCCT GAGGCGGTCG CAGCCCCCAC CTCCTGTGCT GTCGGCGACC TGGAGCCGCC GCCCGCCGCA ACACCGCGTG CGAGCTGGCG CGTCATTGAC GGCAAGAAGC CTGACGCTCC GCGCAGCCTG TGGCCGGCCC TCGGCCGCGA GCAGTTGCTC GGACTGAACG GCAGTGTCAC GAAGTTCGAG GCCAACGTGG CCGCGATCCA GGTGCTGCAA GGCCTCGAAG CTGGCCAGCA GCCCGCGAGC GCCGACCAGC GCCACCAGTT GGTCCGCTTC ACCGGCTGGG GCGGCCTGCC CGCCGCCTTC AACCTCGAAG GCACGGATCC GTCCTGGCGC GGCCGCGCCG AAGCGCTGCA GGCCCTGCTG CCCGCCGACG ACTACGCGTC GGCCCGGGCA TCGGTCAACA ACAGCCACTA CACCGAGGTC CATGTGATCG AGGCCATGTG GCAGGCCGTG GAGCGCTTCG GCTTCACCGG CGGGCGCGTG CTCGAGCCCG CGGCCGGCGT CGGCCACTTC CTGGGCGCCA TGCCCCGCAC GCTCGCCGAG CGCAGCGCGG TCACCGCCAT CGAGATCGAC CAGATTTCCG GCCGGTTGCT GCAGGCGCTG TATGCACCGC ATGGCGCCGA TGTGCGCATC GCGCCGTTCG AGAAGGTGGC GCTGCCCGAG AACTGGTTCG ACCTGGTGAT CGGCAATGTG CCGTTCGGCA ACTACCCGGT CGCTGATGCG AGCCACAAGC CGTACGCGCG GTTCCGCATC CACAACTACT TCTTCGGGCG CGCGCTGGAC CTGGTGCGCC CTGGCGGGCT GGTGTGCTTC ATCACCAGCA CCGGCACGAT GGAGGCACGC GACGACGCGG TGCGTGGGCA CGTGTCCTCC CAGGCCGAGC TGCTCGGGGC CATCCGGCTG CCCAAGGGCG CCTTCGCCGG CATCGCCTCG ACCGAGGTGC AGACCGACAT CCTGTTCCTG CGCAAGCGCC ATTCCGGCGA AGCGGTCAGC GGCGACTGGC TGGACCGCAC GATGGTGCCG CAGGAACTGC TGCACCCGCG CTGCCCGCAC AAGTACCTGC AGATCAATGC CTGGTACGCC AAGCGCCCGC AGTTCTGCAT CGGACGGGTC ACACAGGAGA GCAACGGCTA CGAGGAGATC CCGACCGTCG TGTTCGAGGG CGACCTCGAG CCGGCGCTGG CCGAGCGGGT GGCACTGCTG CCCAGTGGCG TCTACCAGCC GGCCGCGCCA CGGGTGCTGG CACCGGTGCG CGCCGCCGTG CCGGCCGAGG CTGGCGCGCG GCCCGGAAGC TTCCGCCTCC ACCAGGGGCG CGTGCATCGG GTCGAGGACG GCGCCCTGGT CGACGTCCAC GACGGCCTCA ACGCCACCCA GCGCGCCCGC ATCGCGGGCC TGTGCGCGAT CCGCGACCAC GCGCGGGCAC TGCTCGATGC GCAGCTCGCG CAGGACGGCG ACGAAGGGCT GGGCCACCTG CAGTCCATGC TGGGCGGCAG CTACGACGCC TACGTCCAGC GCTACGGGTG CCTCAGCACT CGGGCCAACG CGCTGGCGTT CCGGCGCGAC CCGGACTACC CGCTGCTGCT GTCGCTGGAG CACTACGACG AGGAGTCGGA CACCGCCAGA AAGGCCGCGC TGTTCGCCCA GCGCACGCTG CGGCGGGTTT CGGCCCCGGC ATCGGTCGGC GAGCCTGCCG AAGCGCTGGC AACGTCGGTG CAGTGGCGCG GCCGGGTCGA ACCGGCCTAC ATGGCGCAAT TGCTGTCGGC GCCCGAGCAT GAGGTGCTGG CGGCGCTGTC CGAGGCCGGC CAGATTTTCC TGGACCCGAC CGACGAGGCC TGGAAGACCG CCGACGAGTA CCTGTCCGGC GACGTCAAGG AAAAGCTCAA GCAGGCCGAG CTGTCCGGCG AGGGCTACCG CCGCAACATC GAGGCCCTGC AGCGCGTGCA GCCCGAGGAC CTGCCGCCGG CATCGATCGA ACCGCGCCTC GGCGCGGTCT GGATTCCCGC CGGTGATGTC GAGGCCTTCA TCCACGAAGT GCTCGAGATG AAGGACTGCT CGGTGGCGTA CTCGGCCGAG GCAGGCGCCT GGTCGGTGAA ATACCCGGAC TGGGCCGCGC GCAACAACGT CAAGGTGACC CAGGAATGGG GCACCCGGCG CATGAACGCC GTCGAACTGG TGCTGGCCGC ACTCAATGTG CAGGTGCCGA CGGTGCGCGA CCCGCTGCCG GACTCGGATC GCTACATCGT CAATCAAGAC GAAACGCTCG CCGCGCGCGA GAAGCTGGGC GCTCTGAAAG CGCGGTTCGC TGTCTGGGCC TTCGAAGAAG CTGGACGCCG GGAACGGCTG TGCCGGATCT ACAACGACCT GTTCAACGCG ACGCGGCCGC GAAAGTTCGA TGGCTCGCAC CTGAAGCTGC CGGGCTTCTC GCGCTGCTTC ACGCTGCACC CGCACCAACT GGATTCGGTG TGGCGCATCG TGCAAACCGG CAACGTGGGC CTGTTCCACG TCGTCGGCGC CGGCAAGACG GCGGTCTGCG TGATCGCGAG CATGGAGATG CGGCGCCTGG GTTTCCTCTC GAAGCCCTGC CATGTGGTCC CGAACCACAT GCTGGCGTCC TACACAGCCG AGTTCGTGCG CCTGTACCCG CAGGCCTCGG TGCTCATGGC AGCAAAGGAG GATCTGGAAG GCGACCGCCG GCGCGAGCTG GTGTCGCGCA TCGCCACGGG CGATTGGGAC GCGGTGGTCA TCACGCACTC GAGCTTCGAG CGCATCCGGA TGTCGCCGCA ATTCACTGAA GACCACATCG GGGAGGTGAT CCATGAAATA GAGATGGCCA TCCGCGCCGA GCAAGGCAAT GACAAGTCCA ACCGGATCGT CAAGCAGCTC GAAGTGCAGA AGAAGACCTG GAAGGTCCGG CTGGAGAAGC TCCAGGCCGA TGCCAGGAAG GACGATCTGC TGACCTGGGA GCAGTTGGGC GTTGACGGTC TGTTCGTCGA CGAGGCCCAC CTGCACAAGA ACCTGTTCCG GTTCACCAAA ATGACGCGGG TCGCAGGCCT GCCGCTGACC AATTCGCAGC GTGCATTCGA TCTGTACTTG AAATCGCGCT ACACGATGCA GCTGCACGGC AATGCGCAGC GCGGCGTAGT GTTCGCGACC GCGACGCCGG TGGCCAACAC CATGGCCGAG ATCCACACGA TGCAGCGCTA CCTGCAGCCG CGCCGCCTGG CGCAGCTCGG GCTGCAGCAG TTCGACGCCT GGGCCGCCAC CTTCGGGGAA TCGGTGACTG CGCTGGAGAT CGCGCCGGAC GGCAGCGGCT ACCGCGTGCA CACGCGCTTC GCGCGCTTCA TCAACGTGCC GGAGCTGATG GCCATCTTCG GCGAGGTCGC GGACATCCGC ACCGCCGAGA TGCTGAACCT GCCGGTGCCG AAGCTGCGCG GCGGCAAGCC GCGCACCGTG GCCTGCCCGG CGAGTCCAGC GCTCAAGGCC TACGTGCAGA CGCTGGTCAA GCGCGCCGAG GCGATCCGCA ACGGCACGGT CAAGCCGACC GAGGACAACA TGCTCGCGGT CACGAACGAT GGCCGCGCCG CCGCGCTGGA CTTCCGGCTG ATCGCGCCGA CGGCGCGCTT CGACTCGGAT GGCAAGGTGG CCGCCTGCGC CCGCGAGGTG CTGGCGATCT GGCAGCGCAC GATGGACTTC TGCGGCGCGC AACTGGTGTT CTGCGACCTG TCCAGCCCCA AGGGCGGCAA GGCCTTCAGT GTCTACGAGG ACTTGCGCCA GCGCCTGGTG GATGCCGGTA TTCCCGAGAA AGAGATCGCG TTCATCCACG ATGCGGAGAC CGACGCGCAG AAGGCCACGC TGTTCAAGGC GGTTCGCGAG GGCCGCGTGC GCGTACTGCT GGGCTCGACC GGCAAGATGG GCGTGGGCAC CAACGTGCAG ACGCGCCTCG TGGCACTGCA CCACCTCGAT GCGCCGTGGC GTCCCTGCGA CGTCGAGCAG CGCGAGGGCC GCATCCTGCG GCAGGGCAAC GAGTGCGAGG AGGTCGAGAT CTTCCGCTAC GTGACCGAGC AGAGCTTTGA TGCCTACAGC TGGCAGACGC TGGAGACCAA GGCACGCTTC ATCGCGCAGG TGATGAGCGG GGACAAGGGC CTGCGCTCCA TCGAGGACGT GGAGCTCACC ACGCTGAGCT ACGCGGAGGT CAAGGCGCTC GCCTCGGGCA ACCCCATGGT GATCGAGAAG GCCGGTGTCG ATGCGGAGGT GGCCAAGCTC TCCACCCTGT TCTCGGTCTG GCGCAACCAG CGCTGGGCCA ACGAGAGCGA GGTGGGACGG CTGCCCATGC TGATCGAGTC GCTGGAGCAG AAGCTGGTGC TGCAGGCCGA GGATGTGGCC CTGGTGGCGC CCCAGACCAT GGCGCAGATC GCCGTGGAGC TGGGAGGCCG GCGGATCGCC GGGCCGGATG CCGTGGGCGA CGCCTTGCGC GAGCTCGTCA AAACCGCCCG CGCCGCCATC CAGGGCAGAG CCCTGCTATC GGGTCAAATC CTGGGCCGCT TCGGCGGTTT CGAGCTGGGC CTGCAGGCCA TCGGCACCGA GGCGGTGCCG GCGTTCTTCC TCGCGGGGCG CTGCCGCTAC GACGCCGAGC CCTACCAGAC CGGGCCCGGC CTGGTGTCCG CGCTGCTGGC GGCGCTAGCT TCGGTCGGCG AGCAGCAGTC CAGGACGGGC GAACAGCTCG CCCTGCGGCG CAAGCGGCTG GACGATCTCC AGCTGGAGCT GGCCCGGCCG TTCGAGCACG AGGCGCGGCT GACCACCCTG CTGGTGCGCC AGCGCGAGCT GCTCAAACAG CTCGACCTCG ACAAGGACGA GGTCGGCAAT GCCAGCCTGG ATGGAGAAGC GATGCGCCAA GCGGCCTGA
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Protein sequence | MDLFSASPPP EAVAAPTSCA VGDLEPPPAA TPRASWRVID GKKPDAPRSL WPALGREQLL GLNGSVTKFE ANVAAIQVLQ GLEAGQQPAS ADQRHQLVRF TGWGGLPAAF NLEGTDPSWR GRAEALQALL PADDYASARA SVNNSHYTEV HVIEAMWQAV ERFGFTGGRV LEPAAGVGHF LGAMPRTLAE RSAVTAIEID QISGRLLQAL YAPHGADVRI APFEKVALPE NWFDLVIGNV PFGNYPVADA SHKPYARFRI HNYFFGRALD LVRPGGLVCF ITSTGTMEAR DDAVRGHVSS QAELLGAIRL PKGAFAGIAS TEVQTDILFL RKRHSGEAVS GDWLDRTMVP QELLHPRCPH KYLQINAWYA KRPQFCIGRV TQESNGYEEI PTVVFEGDLE PALAERVALL PSGVYQPAAP RVLAPVRAAV PAEAGARPGS FRLHQGRVHR VEDGALVDVH DGLNATQRAR IAGLCAIRDH ARALLDAQLA QDGDEGLGHL QSMLGGSYDA YVQRYGCLST RANALAFRRD PDYPLLLSLE HYDEESDTAR KAALFAQRTL RRVSAPASVG EPAEALATSV QWRGRVEPAY MAQLLSAPEH EVLAALSEAG QIFLDPTDEA WKTADEYLSG DVKEKLKQAE LSGEGYRRNI EALQRVQPED LPPASIEPRL GAVWIPAGDV EAFIHEVLEM KDCSVAYSAE AGAWSVKYPD WAARNNVKVT QEWGTRRMNA VELVLAALNV QVPTVRDPLP DSDRYIVNQD ETLAAREKLG ALKARFAVWA FEEAGRRERL CRIYNDLFNA TRPRKFDGSH LKLPGFSRCF TLHPHQLDSV WRIVQTGNVG LFHVVGAGKT AVCVIASMEM RRLGFLSKPC HVVPNHMLAS YTAEFVRLYP QASVLMAAKE DLEGDRRREL VSRIATGDWD AVVITHSSFE RIRMSPQFTE DHIGEVIHEI EMAIRAEQGN DKSNRIVKQL EVQKKTWKVR LEKLQADARK DDLLTWEQLG VDGLFVDEAH LHKNLFRFTK MTRVAGLPLT NSQRAFDLYL KSRYTMQLHG NAQRGVVFAT ATPVANTMAE IHTMQRYLQP RRLAQLGLQQ FDAWAATFGE SVTALEIAPD GSGYRVHTRF ARFINVPELM AIFGEVADIR TAEMLNLPVP KLRGGKPRTV ACPASPALKA YVQTLVKRAE AIRNGTVKPT EDNMLAVTND GRAAALDFRL IAPTARFDSD GKVAACAREV LAIWQRTMDF CGAQLVFCDL SSPKGGKAFS VYEDLRQRLV DAGIPEKEIA FIHDAETDAQ KATLFKAVRE GRVRVLLGST GKMGVGTNVQ TRLVALHHLD APWRPCDVEQ REGRILRQGN ECEEVEIFRY VTEQSFDAYS WQTLETKARF IAQVMSGDKG LRSIEDVELT TLSYAEVKAL ASGNPMVIEK AGVDAEVAKL STLFSVWRNQ RWANESEVGR LPMLIESLEQ KLVLQAEDVA LVAPQTMAQI AVELGGRRIA GPDAVGDALR ELVKTARAAI QGRALLSGQI LGRFGGFELG LQAIGTEAVP AFFLAGRCRY DAEPYQTGPG LVSALLAALA SVGEQQSRTG EQLALRRKRL DDLQLELARP FEHEARLTTL LVRQRELLKQ LDLDKDEVGN ASLDGEAMRQ AA
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