Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1445 |
Symbol | |
ID | 4672221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1505436 |
End bp | 1507448 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639838549 |
Product | DNA topoisomerase III |
Protein accession | YP_985731 |
Protein GI | 121593835 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.159298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTGT TTCTGTGCGA GAAGCCCTCC CAGGGCAAAG ACATCGGCCG GATTCTCGGC GCCACGCAGC GCGGTGAAGG CTGCCTCAAC GGCTCCGGCG TCACGGTCAC CTGGTGCATC GGCCATCTCG TCGAAGCGGC AGCACCCGAG GTCTATGACG CGGCGCTCAA GCGCTGGTCG TTGGAGCAGT TGCCCATCAT CCCTCAGCAG TGGCGGGTCG AGGTCAAACC GCAGACCGCC ACGCAATTCA AGGTCGTAAA AACGCTTCTG GCGAAGGCGA CCCATCTCGT CATTGCCACC GATGCCGACC GCGAGGGTGA ACTGATCGCC CGCGAGATCA TCGACCTGTG CGGATACCGC GGCCCCATAG CACGCCTGTG GCTGTCGGCG CTCAACGATG CGTCCATCCG CACCGCGCTC GCCAAGCTGC GGCCCTCGGC CGAGACGCTG CCGATGTATT ACTCGGCGCT GGCGCGCTCG CGCGCCGACT GGCTCGTCGG CATGAACCTC AGCCGGCTGT TCACCGTGCT CGGGCGGCAG GCCGGCTACG ACGGCGTGCT GTCGGTCGGG CGTGTACAGA CCCCGACGCT CAAACTCGTG GTGGACCGCG ACCGAGAGAT CGCGGCCTTC GTGTCCGTGC CGTACTGGGC CATCGACGTG TCCCTGTCCG CAGGCGGTCA GACGTTCACC GCGCAGTGGG TGGCACCCGA CGCCAGCACC GACGACGCCG GCCGCTGCCT GCAGCAGCCC GTCGCACAGC AGGCCGCGCA ACAGATCCGC GCCGCGGGCA GTGCCCAGGT GGTGTCGGTC GAGACCGAGC GCGTGCGCGA AGGCCCGCCG CTGCTGTTCG ACCTGGGCAC CTTGCAGGAA GTCTGTTCCA AGCAGCTTGG GCTGGACGTG CAGGAAACCT TGGAGATCGC CCAGGCTCTG TACGAGACGC ACAAGGCCAC GACGTACCCG CGCTCGGATT CGGGCTACCT GCCCGAAAGC ATGTTCGCCG AGGTGCCCAC GGTCCTGGAC AGCCTGCTCA AGACCGATCC CACGCTGGCC CCGATCATGG GCCAGCTCGA CCGCGCCCAG CGCTCGCGCG CCTGGAACGA CAGCAAGGTG ACGGCGCACC ACGGCATCAT CCCGACGCTC GAACCCGCGA ACCTCTCCGC CATGAGCGAG AAGGAGCAGG CGGTGTACCG GCTGATCCGG GCGCATTACC TGGCCCAGTT CCTCCCGCAC CACGAGTTCG ACCGCACGAT CGCCGAGCTG TCCTGCGGCC AGCAGAAGCT GGTGGCCACC GGAAAGCAGG TGGCCGCCCA GGGTTGGCAC CTGGTGCTGG CCGAGCCGCA AGCGGACGAG GACGGGGAAA CCACCGCGCG CAGCCAGGTA CTCCCCGCGC TGCGCGAGGG CCTGGCATGC CAAGTGGCCG AGGCCGAAGT CAAGGCGCTC AAGACGCTGC CTCCGAAGCC CTACACGCAG GGCGAACTGG TCAAGTCGAT GAAAGGCGTG GCGCGCTTCG TGACCGACCC GCGCCTGAAG CAGAAGTTGA AGGACACGAC GGGCATTGGC ACCGAAGCCA CGCGCGCCAA CATCATCACC GGCCTGCTGA CGCGGGGCTA TCTCGTGAAG AAAGGACGCT CCATTCGCGC ATCGGATGCG GCGCTCACGC TGATAGACGC CGTGCCCGCG GCGATTGCCG ACCCCGGAAC CACCGCCGTG TGGGAGCAGG CGCTGGACAT GATCGAGGCC GGACAACTCA CCCTGGATGT GTTCATCGGC AAGCAGGCCG CATGGATTTC GCAACTGATC GTGCAGTACG GCAGCACCTC GCTGTCCATC AAGGTTCCCC AGGGTCCCGC TTGCCCGCAG TGCGGCGCAC CGACGCGCCA GCGCACCGGC AAGACCGGCC CCTTCTGGTC GTGCAGTCGC TACCCCGACT GCAAAGGCAC GCTGCCGGTC GAAACCGGCA CGTCCAAGCG TGGTGCCTCG CGCCCACGCA AGAGCGGCCG CAAAGGCTCC TGA
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Protein sequence | MRLFLCEKPS QGKDIGRILG ATQRGEGCLN GSGVTVTWCI GHLVEAAAPE VYDAALKRWS LEQLPIIPQQ WRVEVKPQTA TQFKVVKTLL AKATHLVIAT DADREGELIA REIIDLCGYR GPIARLWLSA LNDASIRTAL AKLRPSAETL PMYYSALARS RADWLVGMNL SRLFTVLGRQ AGYDGVLSVG RVQTPTLKLV VDRDREIAAF VSVPYWAIDV SLSAGGQTFT AQWVAPDAST DDAGRCLQQP VAQQAAQQIR AAGSAQVVSV ETERVREGPP LLFDLGTLQE VCSKQLGLDV QETLEIAQAL YETHKATTYP RSDSGYLPES MFAEVPTVLD SLLKTDPTLA PIMGQLDRAQ RSRAWNDSKV TAHHGIIPTL EPANLSAMSE KEQAVYRLIR AHYLAQFLPH HEFDRTIAEL SCGQQKLVAT GKQVAAQGWH LVLAEPQADE DGETTARSQV LPALREGLAC QVAEAEVKAL KTLPPKPYTQ GELVKSMKGV ARFVTDPRLK QKLKDTTGIG TEATRANIIT GLLTRGYLVK KGRSIRASDA ALTLIDAVPA AIADPGTTAV WEQALDMIEA GQLTLDVFIG KQAAWISQLI VQYGSTSLSI KVPQGPACPQ CGAPTRQRTG KTGPFWSCSR YPDCKGTLPV ETGTSKRGAS RPRKSGRKGS
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